Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN1P18031 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN1P18031 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.4■□□□□ 0.7
PTPN1P18031 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.4■□□□□ 0.7
PTPN1P18031 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PTPN1P18031 AC069148.1-201ENST00000608741 768 ntBASIC19.4■□□□□ 0.7
PTPN1P18031 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN1P18031 AC093458.2-201ENST00000623150 629 ntBASIC19.4■□□□□ 0.7
PTPN1P18031 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 AC016734.2-201ENST00000624325 1377 ntBASIC19.4■□□□□ 0.7
PTPN1P18031 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN1P18031 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 LINC01126-201ENST00000623515 1646 ntBASIC19.4■□□□□ 0.7
PTPN1P18031 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PTPN1P18031 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTPN1P18031 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.4■□□□□ 0.7
PTPN1P18031 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PTPN1P18031 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.39■□□□□ 0.7
PTPN1P18031 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.39■□□□□ 0.7
PTPN1P18031 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN1P18031 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN1P18031 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN1P18031 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN1P18031 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN1P18031 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.39■□□□□ 0.69
PTPN1P18031 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.39■□□□□ 0.69
PTPN1P18031 KRT8P26-201ENST00000534154 1276 ntBASIC19.39■□□□□ 0.69
PTPN1P18031 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.39■□□□□ 0.69
PTPN1P18031 GPR32P1-201ENST00000601788 811 ntBASIC19.39■□□□□ 0.69
PTPN1P18031 AL390719.2-201ENST00000606993 987 ntBASIC19.39■□□□□ 0.69
PTPN1P18031 AL121672.3-201ENST00000608644 468 ntBASIC19.39■□□□□ 0.69
PTPN1P18031 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN1P18031 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN1P18031 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.39■□□□□ 0.69
PTPN1P18031 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN1P18031 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN1P18031 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN1P18031 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PTPN1P18031 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN1P18031 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN1P18031 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN1P18031 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN1P18031 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PTPN1P18031 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN1P18031 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.39■□□□□ 0.69
PTPN1P18031 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTPN1P18031 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN1P18031 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN1P18031 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN1P18031 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN1P18031 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN1P18031 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN1P18031 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN1P18031 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN1P18031 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN1P18031 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN1P18031 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN1P18031 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN1P18031 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PTPN1P18031 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.38■□□□□ 0.69
PTPN1P18031 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.38■□□□□ 0.69
PTPN1P18031 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN1P18031 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN1P18031 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN1P18031 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN1P18031 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN1P18031 AC008687.5-201ENST00000593746 558 ntBASIC19.38■□□□□ 0.69
PTPN1P18031 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN1P18031 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PTPN1P18031 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN1P18031 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN1P18031 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PTPN1P18031 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTPN1P18031 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTPN1P18031 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN1P18031 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPN1P18031 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN1P18031 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN1P18031 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.37■□□□□ 0.69
PTPN1P18031 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
PTPN1P18031 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN1P18031 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPN1P18031 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPN1P18031 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms