Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL4P13236 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCL4P13236 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL4P13236 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL4P13236 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
CCL4P13236 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL4P13236 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCL4P13236 AC008687.5-201ENST00000593746 558 ntBASIC17.29■□□□□ 0.36
CCL4P13236 GPALPP1-207ENST00000611650 899 ntBASIC17.29■□□□□ 0.36
CCL4P13236 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.29■□□□□ 0.36
CCL4P13236 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL4P13236 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL4P13236 TP73-AS1-210ENST00000637775 1455 ntBASIC17.29■□□□□ 0.36
CCL4P13236 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCL4P13236 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCL4P13236 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCL4P13236 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCL4P13236 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL4P13236 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCL4P13236 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL4P13236 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
CCL4P13236 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL4P13236 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL4P13236 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.28■□□□□ 0.36
CCL4P13236 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 AL031284.1-201ENST00000419297 478 ntBASIC17.28■□□□□ 0.36
CCL4P13236 KRT18P67-201ENST00000432816 1264 ntBASIC17.28■□□□□ 0.36
CCL4P13236 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL4P13236 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.28■□□□□ 0.36
CCL4P13236 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL4P13236 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL4P13236 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL4P13236 AC008608.2-201ENST00000606089 416 ntBASIC17.28■□□□□ 0.36
CCL4P13236 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.28■□□□□ 0.36
CCL4P13236 AC006538.3-201ENST00000612495 578 ntBASIC17.28■□□□□ 0.36
CCL4P13236 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.28■□□□□ 0.36
CCL4P13236 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCL4P13236 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL4P13236 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.28■□□□□ 0.36
CCL4P13236 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL4P13236 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL4P13236 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.27■□□□□ 0.36
CCL4P13236 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.27■□□□□ 0.36
CCL4P13236 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CCL4P13236 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.27■□□□□ 0.36
CCL4P13236 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.27■□□□□ 0.36
CCL4P13236 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCL4P13236 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCL4P13236 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCL4P13236 AF186996.4-201ENST00000467186 377 ntBASIC17.27■□□□□ 0.36
CCL4P13236 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.27■□□□□ 0.36
CCL4P13236 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.27■□□□□ 0.36
CCL4P13236 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.27■□□□□ 0.36
CCL4P13236 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.27■□□□□ 0.36
CCL4P13236 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.27■□□□□ 0.36
CCL4P13236 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.27■□□□□ 0.36
CCL4P13236 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.27■□□□□ 0.36
CCL4P13236 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL4P13236 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCL4P13236 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CCL4P13236 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCL4P13236 AC112777.1-201ENST00000540175 1423 ntBASIC17.27■□□□□ 0.35
CCL4P13236 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCL4P13236 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL4P13236 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL4P13236 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CCL4P13236 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL4P13236 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCL4P13236 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL4P13236 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCL4P13236 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCL4P13236 LINC00602-201ENST00000629776 2065 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms