Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNB1P11230 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNB1P11230 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
CHRNB1P11230 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CHRNB1P11230 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNB1P11230 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNB1P11230 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNB1P11230 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNB1P11230 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHRNB1P11230 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHRNB1P11230 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.56■□□□□ 0.56
CHRNB1P11230 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHRNB1P11230 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHRNB1P11230 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.56■□□□□ 0.56
CHRNB1P11230 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.56■□□□□ 0.56
CHRNB1P11230 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNB1P11230 FGFR3P6-201ENST00000457012 610 ntBASIC18.56■□□□□ 0.56
CHRNB1P11230 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.56■□□□□ 0.56
CHRNB1P11230 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.56■□□□□ 0.56
CHRNB1P11230 KRT18P41-201ENST00000518924 1277 ntBASIC18.56■□□□□ 0.56
CHRNB1P11230 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.56■□□□□ 0.56
CHRNB1P11230 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.56■□□□□ 0.56
CHRNB1P11230 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CHRNB1P11230 TERC-201ENST00000602385 541 ntBASIC18.56■□□□□ 0.56
CHRNB1P11230 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.56■□□□□ 0.56
CHRNB1P11230 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNB1P11230 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNB1P11230 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.56■□□□□ 0.56
CHRNB1P11230 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNB1P11230 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNB1P11230 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNB1P11230 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNB1P11230 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNB1P11230 PCDHAC2-203ENST00000615316 3011 ntBASIC18.55■□□□□ 0.56
CHRNB1P11230 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHRNB1P11230 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHRNB1P11230 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHRNB1P11230 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNB1P11230 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNB1P11230 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNB1P11230 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.55■□□□□ 0.56
CHRNB1P11230 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNB1P11230 HNRNPDP1-201ENST00000439535 754 ntBASIC18.55■□□□□ 0.56
CHRNB1P11230 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNB1P11230 AC092183.1-201ENST00000469884 875 ntBASIC18.55■□□□□ 0.56
CHRNB1P11230 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHRNB1P11230 AC073648.2-201ENST00000510116 352 ntBASIC18.55■□□□□ 0.56
CHRNB1P11230 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.55■□□□□ 0.56
CHRNB1P11230 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNB1P11230 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNB1P11230 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNB1P11230 AC005336.2-201ENST00000593183 939 ntBASIC18.55■□□□□ 0.56
CHRNB1P11230 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNB1P11230 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNB1P11230 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNB1P11230 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNB1P11230 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHRNB1P11230 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNB1P11230 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.54■□□□□ 0.56
CHRNB1P11230 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNB1P11230 HEIH-201ENST00000623091 1652 ntBASIC18.54■□□□□ 0.56
CHRNB1P11230 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.54■□□□□ 0.56
CHRNB1P11230 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNB1P11230 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.54■□□□□ 0.56
CHRNB1P11230 TP73-AS1-210ENST00000637775 1455 ntBASIC18.54■□□□□ 0.56
CHRNB1P11230 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNB1P11230 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNB1P11230 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNB1P11230 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNB1P11230 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNB1P11230 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CHRNB1P11230 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.54■□□□□ 0.56
CHRNB1P11230 SCARNA2-201ENST00000458748 420 ntBASIC18.54■□□□□ 0.56
CHRNB1P11230 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.54■□□□□ 0.56
CHRNB1P11230 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.54■□□□□ 0.56
CHRNB1P11230 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
CHRNB1P11230 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.54■□□□□ 0.56
CHRNB1P11230 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.54■□□□□ 0.56
CHRNB1P11230 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNB1P11230 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.54■□□□□ 0.56
CHRNB1P11230 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CHRNB1P11230 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNB1P11230 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CHRNB1P11230 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNB1P11230 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNB1P11230 ZNF259P1-201ENST00000407656 1365 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms