Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM1P09493 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TPM1P09493 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM1P09493 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM1P09493 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM1P09493 MYLKP1-201ENST00000509077 1580 ntBASIC20.25■□□□□ 0.83
TPM1P09493 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TPM1P09493 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPM1P09493 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM1P09493 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM1P09493 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM1P09493 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.24■□□□□ 0.83
TPM1P09493 AC008556.1-201ENST00000610908 2040 ntBASIC20.24■□□□□ 0.83
TPM1P09493 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM1P09493 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM1P09493 NFIC-211ENST00000641145 8399 ntBASIC20.24■□□□□ 0.83
TPM1P09493 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.24■□□□□ 0.83
TPM1P09493 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPM1P09493 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.24■□□□□ 0.83
TPM1P09493 MTDHP1-201ENST00000605323 784 ntBASIC20.24■□□□□ 0.83
TPM1P09493 AL445675.2-201ENST00000620291 557 ntBASIC20.24■□□□□ 0.83
TPM1P09493 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.24■□□□□ 0.83
TPM1P09493 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.24■□□□□ 0.83
TPM1P09493 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TPM1P09493 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM1P09493 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM1P09493 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TPM1P09493 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
TPM1P09493 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.24■□□□□ 0.83
TPM1P09493 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TPM1P09493 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TPM1P09493 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TPM1P09493 RCC2P3-201ENST00000418112 1537 ntBASIC20.23■□□□□ 0.83
TPM1P09493 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TPM1P09493 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TPM1P09493 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM1P09493 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM1P09493 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM1P09493 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM1P09493 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM1P09493 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM1P09493 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
TPM1P09493 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.23■□□□□ 0.83
TPM1P09493 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TPM1P09493 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.23■□□□□ 0.83
TPM1P09493 REXO1L9P-201ENST00000604264 2108 ntBASIC20.23■□□□□ 0.83
TPM1P09493 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TPM1P09493 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM1P09493 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM1P09493 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM1P09493 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TPM1P09493 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.22■□□□□ 0.83
TPM1P09493 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TPM1P09493 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM1P09493 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM1P09493 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM1P09493 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM1P09493 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.22■□□□□ 0.83
TPM1P09493 AC239809.2-201ENST00000415381 517 ntBASIC20.22■□□□□ 0.83
TPM1P09493 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.22■□□□□ 0.83
TPM1P09493 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TPM1P09493 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.22■□□□□ 0.83
TPM1P09493 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM1P09493 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM1P09493 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TPM1P09493 HTR7P1-201ENST00000538670 1336 ntBASIC20.22■□□□□ 0.83
TPM1P09493 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TPM1P09493 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
TPM1P09493 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TPM1P09493 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
TPM1P09493 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.21■□□□□ 0.83
TPM1P09493 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM1P09493 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM1P09493 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TPM1P09493 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.21■□□□□ 0.83
TPM1P09493 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.21■□□□□ 0.83
TPM1P09493 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TPM1P09493 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TPM1P09493 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.21■□□□□ 0.83
TPM1P09493 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM1P09493 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TPM1P09493 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TPM1P09493 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TPM1P09493 AC069544.1-201ENST00000609399 999 ntBASIC20.21■□□□□ 0.83
TPM1P09493 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.21■□□□□ 0.83
TPM1P09493 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms