Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.35■□□□□ 0.37
CTSBP07858 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.35■□□□□ 0.37
CTSBP07858 AL845331.1-201ENST00000424978 1190 ntBASIC17.35■□□□□ 0.37
CTSBP07858 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSBP07858 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CTSBP07858 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSBP07858 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSBP07858 IGHV3-41-201ENST00000613121 348 ntBASIC17.35■□□□□ 0.37
CTSBP07858 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.35■□□□□ 0.37
CTSBP07858 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.35■□□□□ 0.37
CTSBP07858 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTSBP07858 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTSBP07858 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSBP07858 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CTSBP07858 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSBP07858 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTSBP07858 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSBP07858 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.34■□□□□ 0.37
CTSBP07858 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
CTSBP07858 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSBP07858 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSBP07858 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSBP07858 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.34■□□□□ 0.37
CTSBP07858 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CTSBP07858 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSBP07858 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.34■□□□□ 0.37
CTSBP07858 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.34■□□□□ 0.37
CTSBP07858 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTSBP07858 LINC00265-3P-201ENST00000447588 903 ntBASIC17.34■□□□□ 0.37
CTSBP07858 TOB2P1-201ENST00000469761 992 ntBASIC17.34■□□□□ 0.37
CTSBP07858 RN7SL606P-201ENST00000472779 293 ntBASIC17.34■□□□□ 0.37
CTSBP07858 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTSBP07858 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSBP07858 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.34■□□□□ 0.37
CTSBP07858 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.34■□□□□ 0.37
CTSBP07858 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSBP07858 AL121894.2-201ENST00000602977 491 ntBASIC17.34■□□□□ 0.37
CTSBP07858 AL592071.1-201ENST00000611956 408 ntBASIC17.34■□□□□ 0.37
CTSBP07858 KRT89P-201ENST00000620027 1478 ntBASIC17.34■□□□□ 0.37
CTSBP07858 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSBP07858 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSBP07858 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTSBP07858 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CTSBP07858 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTSBP07858 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.33■□□□□ 0.37
CTSBP07858 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSBP07858 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSBP07858 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSBP07858 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CTSBP07858 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.33■□□□□ 0.37
CTSBP07858 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSBP07858 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSBP07858 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTSBP07858 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CTSBP07858 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.33■□□□□ 0.36
CTSBP07858 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.33■□□□□ 0.36
CTSBP07858 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.33■□□□□ 0.36
CTSBP07858 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.33■□□□□ 0.36
CTSBP07858 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CTSBP07858 AP005901.3-202ENST00000581653 237 ntBASIC17.33■□□□□ 0.36
CTSBP07858 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 AC124864.1-201ENST00000623408 392 ntBASIC17.33■□□□□ 0.36
CTSBP07858 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.33■□□□□ 0.36
CTSBP07858 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.33■□□□□ 0.36
CTSBP07858 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.33■□□□□ 0.36
CTSBP07858 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.33■□□□□ 0.36
CTSBP07858 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTSBP07858 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.33■□□□□ 0.36
CTSBP07858 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSBP07858 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.32■□□□□ 0.36
CTSBP07858 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CTSBP07858 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 LINC00602-201ENST00000629776 2065 ntBASIC17.32■□□□□ 0.36
CTSBP07858 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms