Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMNAP02545 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.15■□□□□ 0.66
LMNAP02545 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LMNAP02545 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.15■□□□□ 0.66
LMNAP02545 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMNAP02545 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMNAP02545 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMNAP02545 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMNAP02545 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LMNAP02545 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMNAP02545 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.15■□□□□ 0.66
LMNAP02545 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMNAP02545 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LMNAP02545 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
LMNAP02545 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.14■□□□□ 0.66
LMNAP02545 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LMNAP02545 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
LMNAP02545 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LMNAP02545 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LMNAP02545 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.14■□□□□ 0.66
LMNAP02545 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.14■□□□□ 0.65
LMNAP02545 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.65
LMNAP02545 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.14■□□□□ 0.65
LMNAP02545 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.14■□□□□ 0.65
LMNAP02545 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.14■□□□□ 0.65
LMNAP02545 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
LMNAP02545 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.14■□□□□ 0.65
LMNAP02545 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.14■□□□□ 0.65
LMNAP02545 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.14■□□□□ 0.65
LMNAP02545 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LMNAP02545 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.14■□□□□ 0.65
LMNAP02545 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMNAP02545 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
LMNAP02545 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LMNAP02545 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.13■□□□□ 0.65
LMNAP02545 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.13■□□□□ 0.65
LMNAP02545 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.13■□□□□ 0.65
LMNAP02545 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMNAP02545 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMNAP02545 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.13■□□□□ 0.65
LMNAP02545 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.13■□□□□ 0.65
LMNAP02545 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMNAP02545 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.13■□□□□ 0.65
LMNAP02545 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMNAP02545 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
LMNAP02545 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMNAP02545 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.13■□□□□ 0.65
LMNAP02545 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.13■□□□□ 0.65
LMNAP02545 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.13■□□□□ 0.65
LMNAP02545 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.13■□□□□ 0.65
LMNAP02545 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.13■□□□□ 0.65
LMNAP02545 KRT16P6-202ENST00000425692 1426 ntBASIC19.13■□□□□ 0.65
LMNAP02545 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.13■□□□□ 0.65
LMNAP02545 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMNAP02545 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.13■□□□□ 0.65
LMNAP02545 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.13■□□□□ 0.65
LMNAP02545 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LMNAP02545 NOC2LP2-201ENST00000407594 1944 ntBASIC19.13■□□□□ 0.65
LMNAP02545 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LMNAP02545 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LMNAP02545 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMNAP02545 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
LMNAP02545 NOC2LP1-202ENST00000452600 2235 ntBASIC19.13■□□□□ 0.65
LMNAP02545 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMNAP02545 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMNAP02545 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMNAP02545 AC104581.1-202ENST00000635932 2618 ntBASIC19.12■□□□□ 0.65
LMNAP02545 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.12■□□□□ 0.65
LMNAP02545 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.12■□□□□ 0.65
LMNAP02545 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.12■□□□□ 0.65
LMNAP02545 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.12■□□□□ 0.65
LMNAP02545 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.12■□□□□ 0.65
LMNAP02545 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMNAP02545 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LMNAP02545 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMNAP02545 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMNAP02545 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMNAP02545 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.12■□□□□ 0.65
LMNAP02545 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMNAP02545 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LMNAP02545 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.12■□□□□ 0.65
LMNAP02545 FAM220CP-201ENST00000395253 831 ntBASIC19.12■□□□□ 0.65
LMNAP02545 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LMNAP02545 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LMNAP02545 AL590627.1-203ENST00000421194 1026 ntBASIC19.12■□□□□ 0.65
LMNAP02545 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.12■□□□□ 0.65
LMNAP02545 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.12■□□□□ 0.65
LMNAP02545 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LMNAP02545 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms