Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFP01375 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TNFP01375 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFP01375 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFP01375 AC099343.3-201ENST00000605834 2503 ntBASIC17.9■□□□□ 0.46
TNFP01375 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFP01375 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFP01375 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.9■□□□□ 0.46
TNFP01375 FOSL1P1-201ENST00000511041 816 ntBASIC17.9■□□□□ 0.46
TNFP01375 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFP01375 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFP01375 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.9■□□□□ 0.46
TNFP01375 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFP01375 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TNFP01375 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFP01375 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFP01375 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.9■□□□□ 0.46
TNFP01375 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.9■□□□□ 0.46
TNFP01375 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TNFP01375 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.9■□□□□ 0.46
TNFP01375 BCL2-203ENST00000589955 5011 ntBASIC17.9■□□□□ 0.46
TNFP01375 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TNFP01375 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.89■□□□□ 0.46
TNFP01375 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TNFP01375 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.89■□□□□ 0.46
TNFP01375 LINC00167-201ENST00000530583 1419 ntBASIC17.89■□□□□ 0.46
TNFP01375 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TNFP01375 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TNFP01375 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.89■□□□□ 0.45
TNFP01375 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TNFP01375 SLC25A24-204ENST00000569674 2357 ntBASIC17.89■□□□□ 0.45
TNFP01375 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TNFP01375 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TNFP01375 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 AC004870.1-201ENST00000315132 882 ntBASIC17.89■□□□□ 0.45
TNFP01375 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.89■□□□□ 0.45
TNFP01375 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TNFP01375 TSPY19P-201ENST00000418461 509 ntBASIC17.89■□□□□ 0.45
TNFP01375 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 AC026396.1-201ENST00000419388 421 ntBASIC17.89■□□□□ 0.45
TNFP01375 TSPY18P-201ENST00000441642 509 ntBASIC17.89■□□□□ 0.45
TNFP01375 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.89■□□□□ 0.45
TNFP01375 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.89■□□□□ 0.45
TNFP01375 RN7SL510P-201ENST00000581311 263 ntBASIC17.89■□□□□ 0.45
TNFP01375 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.89■□□□□ 0.45
TNFP01375 AC099336.1-202ENST00000602961 463 ntBASIC17.89■□□□□ 0.45
TNFP01375 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.89■□□□□ 0.45
TNFP01375 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.89■□□□□ 0.45
TNFP01375 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.89■□□□□ 0.45
TNFP01375 ANO7L1-203ENST00000602586 1720 ntBASIC17.89■□□□□ 0.45
TNFP01375 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TNFP01375 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.89■□□□□ 0.45
TNFP01375 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFP01375 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFP01375 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFP01375 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFP01375 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFP01375 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFP01375 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFP01375 TSPY12P-201ENST00000421279 868 ntBASIC17.88■□□□□ 0.45
TNFP01375 AC246785.2-201ENST00000432512 513 ntBASIC17.88■□□□□ 0.45
TNFP01375 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFP01375 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFP01375 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFP01375 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.88■□□□□ 0.45
TNFP01375 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.88■□□□□ 0.45
TNFP01375 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TNFP01375 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFP01375 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.88■□□□□ 0.45
TNFP01375 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.88■□□□□ 0.45
TNFP01375 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TNFP01375 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.88■□□□□ 0.45
TNFP01375 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TNFP01375 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.88■□□□□ 0.45
TNFP01375 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TNFP01375 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TNFP01375 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFP01375 AL024508.2-201ENST00000607749 1894 ntBASIC17.87■□□□□ 0.45
TNFP01375 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TNFP01375 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.87■□□□□ 0.45
TNFP01375 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms