Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 AC239800.4-201ENST00000603712 296 ntBASIC20.87■□□□□ 0.93
ALDH1A1P00352 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ALDH1A1P00352 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ALDH1A1P00352 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ALDH1A1P00352 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ALDH1A1P00352 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ALDH1A1P00352 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.87■□□□□ 0.93
ALDH1A1P00352 HEIH-201ENST00000623091 1652 ntBASIC20.86■□□□□ 0.93
ALDH1A1P00352 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.86■□□□□ 0.93
ALDH1A1P00352 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 MIR770-201ENST00000390219 98 ntBASIC20.86■□□□□ 0.93
ALDH1A1P00352 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.86■□□□□ 0.93
ALDH1A1P00352 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.86■□□□□ 0.93
ALDH1A1P00352 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.86■□□□□ 0.93
ALDH1A1P00352 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.86■□□□□ 0.93
ALDH1A1P00352 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.86■□□□□ 0.93
ALDH1A1P00352 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 AC108751.1-201ENST00000490852 363 ntBASIC20.86■□□□□ 0.93
ALDH1A1P00352 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.86■□□□□ 0.93
ALDH1A1P00352 AL022326.1-202ENST00000641533 845 ntBASIC20.86■□□□□ 0.93
ALDH1A1P00352 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ALDH1A1P00352 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ALDH1A1P00352 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.86■□□□□ 0.93
ALDH1A1P00352 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALDH1A1P00352 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ALDH1A1P00352 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALDH1A1P00352 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ALDH1A1P00352 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ALDH1A1P00352 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 AC097374.2-201ENST00000618617 1306 ntBASIC20.85■□□□□ 0.93
ALDH1A1P00352 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALDH1A1P00352 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALDH1A1P00352 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 KRT18P27-201ENST00000427733 1299 ntBASIC20.85■□□□□ 0.93
ALDH1A1P00352 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 C20orf181-201ENST00000623918 480 ntBASIC20.85■□□□□ 0.93
ALDH1A1P00352 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALDH1A1P00352 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.85■□□□□ 0.93
ALDH1A1P00352 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALDH1A1P00352 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ALDH1A1P00352 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ALDH1A1P00352 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.84■□□□□ 0.93
ALDH1A1P00352 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.84■□□□□ 0.93
ALDH1A1P00352 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 AL035633.1-201ENST00000406139 838 ntBASIC20.84■□□□□ 0.93
ALDH1A1P00352 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
ALDH1A1P00352 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ALDH1A1P00352 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.84■□□□□ 0.93
ALDH1A1P00352 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.84■□□□□ 0.93
ALDH1A1P00352 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.84■□□□□ 0.93
ALDH1A1P00352 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALDH1A1P00352 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ALDH1A1P00352 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ALDH1A1P00352 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ALDH1A1P00352 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.83■□□□□ 0.93
ALDH1A1P00352 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ALDH1A1P00352 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ALDH1A1P00352 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
ALDH1A1P00352 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.83■□□□□ 0.93
ALDH1A1P00352 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.83■□□□□ 0.93
ALDH1A1P00352 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms