Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
SIX3O95343 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SIX3O95343 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 AC134043.2-201ENST00000624206 2238 ntBASIC17.95■□□□□ 0.46
SIX3O95343 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.95■□□□□ 0.46
SIX3O95343 AL163051.1-201ENST00000569214 1512 ntBASIC17.95■□□□□ 0.46
SIX3O95343 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.95■□□□□ 0.46
SIX3O95343 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.95■□□□□ 0.46
SIX3O95343 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SIX3O95343 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.95■□□□□ 0.46
SIX3O95343 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.95■□□□□ 0.46
SIX3O95343 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.95■□□□□ 0.46
SIX3O95343 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SIX3O95343 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.95■□□□□ 0.46
SIX3O95343 HTR7P1-202ENST00000624664 4411 ntBASIC17.95■□□□□ 0.46
SIX3O95343 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SIX3O95343 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.95■□□□□ 0.46
SIX3O95343 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SIX3O95343 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.95■□□□□ 0.46
SIX3O95343 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SIX3O95343 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.94■□□□□ 0.46
SIX3O95343 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SIX3O95343 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SIX3O95343 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX3O95343 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SIX3O95343 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX3O95343 AL353719.1-201ENST00000566847 864 ntBASIC17.94■□□□□ 0.46
SIX3O95343 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 CR769767.2-201ENST00000622735 460 ntBASIC17.94■□□□□ 0.46
SIX3O95343 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.94■□□□□ 0.46
SIX3O95343 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SIX3O95343 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SIX3O95343 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX3O95343 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.94■□□□□ 0.46
SIX3O95343 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SIX3O95343 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SIX3O95343 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX3O95343 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SIX3O95343 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.93■□□□□ 0.46
SIX3O95343 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SIX3O95343 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX3O95343 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
SIX3O95343 SLC25A1P2-201ENST00000430693 912 ntBASIC17.93■□□□□ 0.46
SIX3O95343 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.93■□□□□ 0.46
SIX3O95343 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.93■□□□□ 0.46
SIX3O95343 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.93■□□□□ 0.46
SIX3O95343 MIR4785-201ENST00000585005 73 ntBASIC17.93■□□□□ 0.46
SIX3O95343 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.93■□□□□ 0.46
SIX3O95343 AP000997.3-201ENST00000623333 2250 ntBASIC17.93■□□□□ 0.46
SIX3O95343 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SIX3O95343 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX3O95343 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX3O95343 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SIX3O95343 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.92■□□□□ 0.46
SIX3O95343 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SIX3O95343 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SIX3O95343 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.92■□□□□ 0.46
SIX3O95343 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SIX3O95343 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SIX3O95343 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms