Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CEACAM4O75871 ZNF259P1-201ENST00000407656 1365 ntBASIC16.64■□□□□ 0.25
CEACAM4O75871 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.63■□□□□ 0.25
CEACAM4O75871 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CEACAM4O75871 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.63■□□□□ 0.25
CEACAM4O75871 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 ABCD1P5-201ENST00000445663 754 ntBASIC16.63■□□□□ 0.25
CEACAM4O75871 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CEACAM4O75871 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 POLD2P1-201ENST00000511220 997 ntBASIC16.63■□□□□ 0.25
CEACAM4O75871 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.63■□□□□ 0.25
CEACAM4O75871 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.63■□□□□ 0.25
CEACAM4O75871 AC116407.3-201ENST00000623905 1129 ntBASIC16.63■□□□□ 0.25
CEACAM4O75871 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.63■□□□□ 0.25
CEACAM4O75871 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.63■□□□□ 0.25
CEACAM4O75871 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CEACAM4O75871 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CEACAM4O75871 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CEACAM4O75871 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CEACAM4O75871 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 PCDHAC2-203ENST00000615316 3011 ntBASIC16.63■□□□□ 0.25
CEACAM4O75871 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CEACAM4O75871 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CEACAM4O75871 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
CEACAM4O75871 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.62■□□□□ 0.25
CEACAM4O75871 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.62■□□□□ 0.25
CEACAM4O75871 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.62■□□□□ 0.25
CEACAM4O75871 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.62■□□□□ 0.25
CEACAM4O75871 KRT18P65-201ENST00000439811 1286 ntBASIC16.62■□□□□ 0.25
CEACAM4O75871 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.62■□□□□ 0.25
CEACAM4O75871 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.62■□□□□ 0.25
CEACAM4O75871 AC145285.3-201ENST00000564603 959 ntBASIC16.62■□□□□ 0.25
CEACAM4O75871 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.62■□□□□ 0.25
CEACAM4O75871 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.62■□□□□ 0.25
CEACAM4O75871 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.62■□□□□ 0.25
CEACAM4O75871 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CEACAM4O75871 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CEACAM4O75871 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CEACAM4O75871 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CEACAM4O75871 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CEACAM4O75871 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.61■□□□□ 0.25
CEACAM4O75871 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.61■□□□□ 0.25
CEACAM4O75871 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CEACAM4O75871 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CEACAM4O75871 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.61■□□□□ 0.25
CEACAM4O75871 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.61■□□□□ 0.25
CEACAM4O75871 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.61■□□□□ 0.25
CEACAM4O75871 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CEACAM4O75871 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.61■□□□□ 0.25
CEACAM4O75871 AC021087.4-201ENST00000563761 564 ntBASIC16.61■□□□□ 0.25
CEACAM4O75871 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CEACAM4O75871 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 TERC-201ENST00000602385 541 ntBASIC16.61■□□□□ 0.25
CEACAM4O75871 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.61■□□□□ 0.25
CEACAM4O75871 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CEACAM4O75871 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CEACAM4O75871 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.61■□□□□ 0.25
CEACAM4O75871 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CEACAM4O75871 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.61■□□□□ 0.25
CEACAM4O75871 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CEACAM4O75871 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
CEACAM4O75871 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.6■□□□□ 0.25
CEACAM4O75871 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.6■□□□□ 0.25
CEACAM4O75871 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms