Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 EDF1-203ENST00000371649 790 ntTSL 2 BASIC8.14□□□□□ -1.11
USH2AO75445 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC8.14□□□□□ -1.11
USH2AO75445 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC8.14□□□□□ -1.11
USH2AO75445 KRT89P-201ENST00000620027 1478 ntBASIC8.14□□□□□ -1.11
USH2AO75445 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 AC006504.4-201ENST00000592118 1568 ntBASIC8.14□□□□□ -1.11
USH2AO75445 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 SLC4A1APP2-201ENST00000424054 1259 ntBASIC8.14□□□□□ -1.11
USH2AO75445 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC8.14□□□□□ -1.11
USH2AO75445 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC8.14□□□□□ -1.11
USH2AO75445 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC8.14□□□□□ -1.11
USH2AO75445 AL359881.2-201ENST00000602973 570 ntBASIC8.14□□□□□ -1.11
USH2AO75445 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC8.14□□□□□ -1.11
USH2AO75445 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC8.14□□□□□ -1.11
USH2AO75445 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC8.14□□□□□ -1.11
USH2AO75445 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
USH2AO75445 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 ZNF815P-204ENST00000434898 1737 ntBASIC8.14□□□□□ -1.11
USH2AO75445 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 MRPS18AP1-201ENST00000414458 589 ntBASIC8.14□□□□□ -1.11
USH2AO75445 AC055876.3-201ENST00000431496 288 ntBASIC8.14□□□□□ -1.11
USH2AO75445 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC8.14□□□□□ -1.11
USH2AO75445 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
USH2AO75445 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC8.14□□□□□ -1.11
USH2AO75445 AC138649.4-201ENST00000612222 287 ntBASIC8.14□□□□□ -1.11
USH2AO75445 AC073592.4-201ENST00000623827 446 ntBASIC8.14□□□□□ -1.11
USH2AO75445 AL033527.4-201ENST00000641026 673 ntBASIC8.14□□□□□ -1.11
USH2AO75445 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
USH2AO75445 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
USH2AO75445 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC8.14□□□□□ -1.11
USH2AO75445 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC8.13□□□□□ -1.11
USH2AO75445 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC8.13□□□□□ -1.11
USH2AO75445 AC009237.14-201ENST00000609975 1594 ntBASIC8.13□□□□□ -1.11
USH2AO75445 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
USH2AO75445 AC034236.2-201ENST00000606662 1610 ntBASIC8.13□□□□□ -1.11
USH2AO75445 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC8.13□□□□□ -1.11
USH2AO75445 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 IGHV3OR16-6-201ENST00000568775 360 ntBASIC8.13□□□□□ -1.11
USH2AO75445 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC8.13□□□□□ -1.11
USH2AO75445 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
USH2AO75445 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC8.13□□□□□ -1.11
USH2AO75445 NEK7-201ENST00000367383 586 ntTSL 2 BASIC8.13□□□□□ -1.11
USH2AO75445 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 DAD1-205ENST00000543337 501 ntTSL 3 BASIC8.13□□□□□ -1.11
USH2AO75445 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
USH2AO75445 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC8.13□□□□□ -1.11
USH2AO75445 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC8.13□□□□□ -1.11
USH2AO75445 SRP9-204ENST00000619790 377 ntTSL 2 BASIC8.13□□□□□ -1.11
USH2AO75445 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
USH2AO75445 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 AC073314.1-201ENST00000568729 2216 ntBASIC8.13□□□□□ -1.11
USH2AO75445 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
USH2AO75445 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC8.13□□□□□ -1.11
USH2AO75445 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC8.13□□□□□ -1.11
USH2AO75445 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC8.13□□□□□ -1.11
USH2AO75445 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
USH2AO75445 MSRA-206ENST00000521209 814 ntTSL 3 BASIC8.13□□□□□ -1.11
USH2AO75445 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 HILS1-202ENST00000545329 423 ntBASIC8.13□□□□□ -1.11
USH2AO75445 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC8.13□□□□□ -1.11
USH2AO75445 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC8.13□□□□□ -1.11
USH2AO75445 DET1-207ENST00000564406 2315 ntTSL 2 BASIC8.13□□□□□ -1.11
USH2AO75445 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 FO538757.1-201ENST00000623083 1397 ntBASIC8.13□□□□□ -1.11
USH2AO75445 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
USH2AO75445 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
USH2AO75445 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC8.13□□□□□ -1.11
USH2AO75445 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms