Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LCMT2O60294 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LCMT2O60294 AL391807.1-203ENST00000604392 2365 ntBASIC17.55■□□□□ 0.4
LCMT2O60294 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.55■□□□□ 0.4
LCMT2O60294 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LCMT2O60294 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 LINC01126-201ENST00000623515 1646 ntBASIC17.55■□□□□ 0.4
LCMT2O60294 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.55■□□□□ 0.4
LCMT2O60294 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.55■□□□□ 0.4
LCMT2O60294 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.55■□□□□ 0.4
LCMT2O60294 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.55■□□□□ 0.4
LCMT2O60294 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.55■□□□□ 0.4
LCMT2O60294 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LCMT2O60294 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.55■□□□□ 0.4
LCMT2O60294 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LCMT2O60294 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LCMT2O60294 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LCMT2O60294 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 GMCL1P1-201ENST00000463439 1581 ntBASIC17.54■□□□□ 0.4
LCMT2O60294 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
LCMT2O60294 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.54■□□□□ 0.4
LCMT2O60294 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.54■□□□□ 0.4
LCMT2O60294 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.54■□□□□ 0.4
LCMT2O60294 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.54■□□□□ 0.4
LCMT2O60294 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.54■□□□□ 0.4
LCMT2O60294 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
LCMT2O60294 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 AL024508.2-201ENST00000607749 1894 ntBASIC17.54■□□□□ 0.4
LCMT2O60294 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.54■□□□□ 0.4
LCMT2O60294 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LCMT2O60294 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.53■□□□□ 0.4
LCMT2O60294 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.53■□□□□ 0.4
LCMT2O60294 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.53■□□□□ 0.4
LCMT2O60294 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.53■□□□□ 0.4
LCMT2O60294 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.53■□□□□ 0.4
LCMT2O60294 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.53■□□□□ 0.4
LCMT2O60294 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LCMT2O60294 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LCMT2O60294 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LCMT2O60294 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.53■□□□□ 0.4
LCMT2O60294 NTF6B-201ENST00000591913 560 ntBASIC17.53■□□□□ 0.4
LCMT2O60294 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.53■□□□□ 0.4
LCMT2O60294 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
LCMT2O60294 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LCMT2O60294 BICD1-207ENST00000551848 1962 ntBASIC17.53■□□□□ 0.4
LCMT2O60294 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
LCMT2O60294 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LCMT2O60294 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LCMT2O60294 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCMT2O60294 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.52■□□□□ 0.4
LCMT2O60294 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LCMT2O60294 AC093677.2-201ENST00000600169 1863 ntBASIC17.52■□□□□ 0.4
LCMT2O60294 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LCMT2O60294 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCMT2O60294 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.52■□□□□ 0.4
LCMT2O60294 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LCMT2O60294 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCMT2O60294 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCMT2O60294 AC020763.4-201ENST00000623414 4170 ntBASIC17.52■□□□□ 0.4
LCMT2O60294 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LCMT2O60294 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
LCMT2O60294 HBZP1-201ENST00000354915 429 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms