Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSSCA1O60232 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SSSCA1O60232 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 AC124067.4-201ENST00000519691 2379 ntBASIC14.98□□□□□ -0.01
SSSCA1O60232 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 KRT8P41-201ENST00000533985 1514 ntBASIC14.98□□□□□ -0.01
SSSCA1O60232 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SSSCA1O60232 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SSSCA1O60232 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC14.98□□□□□ -0.01
SSSCA1O60232 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.98□□□□□ -0.01
SSSCA1O60232 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.98□□□□□ -0.01
SSSCA1O60232 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.98□□□□□ -0.01
SSSCA1O60232 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SSSCA1O60232 AC120498.8-201ENST00000614275 531 ntBASIC14.98□□□□□ -0.01
SSSCA1O60232 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.98□□□□□ -0.01
SSSCA1O60232 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.98□□□□□ -0.01
SSSCA1O60232 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.98□□□□□ -0.01
SSSCA1O60232 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.98□□□□□ -0.01
SSSCA1O60232 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SSSCA1O60232 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SSSCA1O60232 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSSCA1O60232 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.98□□□□□ -0.01
SSSCA1O60232 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.98□□□□□ -0.01
SSSCA1O60232 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SSSCA1O60232 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SSSCA1O60232 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSSCA1O60232 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
SSSCA1O60232 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.97□□□□□ -0.01
SSSCA1O60232 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.97□□□□□ -0.01
SSSCA1O60232 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.97□□□□□ -0.01
SSSCA1O60232 MIPEPP3-201ENST00000412105 444 ntBASIC14.97□□□□□ -0.01
SSSCA1O60232 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.97□□□□□ -0.01
SSSCA1O60232 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.97□□□□□ -0.01
SSSCA1O60232 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC14.97□□□□□ -0.01
SSSCA1O60232 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.97□□□□□ -0.01
SSSCA1O60232 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.97□□□□□ -0.01
SSSCA1O60232 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.97□□□□□ -0.01
SSSCA1O60232 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.97□□□□□ -0.01
SSSCA1O60232 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SSSCA1O60232 MYLKP1-201ENST00000509077 1580 ntBASIC14.97□□□□□ -0.01
SSSCA1O60232 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSSCA1O60232 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.97□□□□□ -0.01
SSSCA1O60232 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SSSCA1O60232 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSSCA1O60232 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.97□□□□□ -0.01
SSSCA1O60232 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.96□□□□□ -0.01
SSSCA1O60232 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SSSCA1O60232 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.96□□□□□ -0.01
SSSCA1O60232 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.96□□□□□ -0.01
SSSCA1O60232 PP12613-201ENST00000424958 2230 ntBASIC14.96□□□□□ -0.01
SSSCA1O60232 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSSCA1O60232 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
SSSCA1O60232 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms