Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
SSX5O60225 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SSX5O60225 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.76■□□□□ 0.11
SSX5O60225 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SSX5O60225 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.76■□□□□ 0.11
SSX5O60225 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SSX5O60225 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.75■□□□□ 0.11
SSX5O60225 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.75■□□□□ 0.11
SSX5O60225 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.75■□□□□ 0.11
SSX5O60225 AC008556.1-201ENST00000610908 2040 ntBASIC15.75■□□□□ 0.11
SSX5O60225 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SSX5O60225 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.75■□□□□ 0.11
SSX5O60225 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.75■□□□□ 0.11
SSX5O60225 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.75■□□□□ 0.11
SSX5O60225 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 Z85996.1-201ENST00000494644 937 ntBASIC15.75■□□□□ 0.11
SSX5O60225 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.75■□□□□ 0.11
SSX5O60225 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.75■□□□□ 0.11
SSX5O60225 AC098934.4-201ENST00000564127 592 ntBASIC15.75■□□□□ 0.11
SSX5O60225 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.75■□□□□ 0.11
SSX5O60225 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SSX5O60225 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.75■□□□□ 0.11
SSX5O60225 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.75■□□□□ 0.11
SSX5O60225 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.75■□□□□ 0.11
SSX5O60225 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.75■□□□□ 0.11
SSX5O60225 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SSX5O60225 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SSX5O60225 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSX5O60225 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SSX5O60225 REXO1L9P-201ENST00000604264 2108 ntBASIC15.74■□□□□ 0.11
SSX5O60225 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SSX5O60225 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.74■□□□□ 0.11
SSX5O60225 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.74■□□□□ 0.11
SSX5O60225 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.74■□□□□ 0.11
SSX5O60225 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 NBPF21P-201ENST00000425093 1451 ntBASIC15.74■□□□□ 0.11
SSX5O60225 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC15.74■□□□□ 0.11
SSX5O60225 AC006970.2-201ENST00000450065 779 ntBASIC15.74■□□□□ 0.11
SSX5O60225 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.74■□□□□ 0.11
SSX5O60225 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.74■□□□□ 0.11
SSX5O60225 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.74■□□□□ 0.11
SSX5O60225 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.74■□□□□ 0.11
SSX5O60225 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.74■□□□□ 0.11
SSX5O60225 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SSX5O60225 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SSX5O60225 KRT8P11-201ENST00000409686 1436 ntBASIC15.74■□□□□ 0.11
SSX5O60225 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.74■□□□□ 0.11
SSX5O60225 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSX5O60225 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SSX5O60225 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX5O60225 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SSX5O60225 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.73■□□□□ 0.11
SSX5O60225 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX5O60225 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX5O60225 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX5O60225 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSX5O60225 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SSX5O60225 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
SSX5O60225 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SSX5O60225 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.73■□□□□ 0.11
SSX5O60225 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms