Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX4O60224 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX4O60224 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SSX4O60224 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.66■□□□□ 0.26
SSX4O60224 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX4O60224 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SSX4O60224 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SSX4O60224 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.66■□□□□ 0.26
SSX4O60224 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.66■□□□□ 0.26
SSX4O60224 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX4O60224 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.66■□□□□ 0.26
SSX4O60224 AL049597.2-201ENST00000565575 961 ntBASIC16.66■□□□□ 0.26
SSX4O60224 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.66■□□□□ 0.26
SSX4O60224 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX4O60224 AL445228.2-201ENST00000605589 952 ntBASIC16.66■□□□□ 0.26
SSX4O60224 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SSX4O60224 AC092865.7-201ENST00000641832 219 ntBASIC16.66■□□□□ 0.26
SSX4O60224 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SSX4O60224 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX4O60224 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SSX4O60224 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.66■□□□□ 0.26
SSX4O60224 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SSX4O60224 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.66■□□□□ 0.26
SSX4O60224 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SSX4O60224 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.66■□□□□ 0.26
SSX4O60224 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SSX4O60224 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SSX4O60224 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
SSX4O60224 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 AL645608.8-201ENST00000606034 2086 ntBASIC16.65■□□□□ 0.26
SSX4O60224 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.65■□□□□ 0.26
SSX4O60224 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SSX4O60224 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 ARMC10P1-201ENST00000313754 855 ntBASIC16.65■□□□□ 0.26
SSX4O60224 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 AC005521.1-201ENST00000393351 872 ntBASIC16.65■□□□□ 0.26
SSX4O60224 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.65■□□□□ 0.26
SSX4O60224 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.65■□□□□ 0.26
SSX4O60224 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.65■□□□□ 0.26
SSX4O60224 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.65■□□□□ 0.26
SSX4O60224 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SSX4O60224 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.65■□□□□ 0.26
SSX4O60224 AL031985.4-201ENST00000642138 673 ntBASIC16.65■□□□□ 0.26
SSX4O60224 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SSX4O60224 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SSX4O60224 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SSX4O60224 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.65■□□□□ 0.26
SSX4O60224 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.65■□□□□ 0.26
SSX4O60224 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SSX4O60224 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SSX4O60224 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SSX4O60224 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.64■□□□□ 0.26
SSX4O60224 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SSX4O60224 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SSX4O60224 AP001271.2-201ENST00000624018 1556 ntBASIC16.64■□□□□ 0.25
SSX4O60224 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.64■□□□□ 0.25
SSX4O60224 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SSX4O60224 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 AC116562.2-201ENST00000507042 360 ntBASIC16.64■□□□□ 0.25
SSX4O60224 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.64■□□□□ 0.25
SSX4O60224 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.64■□□□□ 0.25
SSX4O60224 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SSX4O60224 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSX4O60224 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.64■□□□□ 0.25
SSX4O60224 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.64■□□□□ 0.25
SSX4O60224 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SSX4O60224 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 KRT18P22-201ENST00000402024 1347 ntBASIC16.64■□□□□ 0.25
SSX4O60224 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SSX4O60224 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.64■□□□□ 0.25
SSX4O60224 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.64■□□□□ 0.25
SSX4O60224 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SSX4O60224 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.64■□□□□ 0.25
SSX4O60224 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SSX4O60224 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SSX4O60224 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SSX4O60224 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms