Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACTN4O43707 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.59■□□□□ 0.89
ACTN4O43707 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ACTN4O43707 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTN4O43707 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTN4O43707 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTN4O43707 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ACTN4O43707 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTN4O43707 SLC25A6P5-201ENST00000435663 894 ntBASIC20.59■□□□□ 0.89
ACTN4O43707 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.59■□□□□ 0.89
ACTN4O43707 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.59■□□□□ 0.89
ACTN4O43707 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.59■□□□□ 0.89
ACTN4O43707 C2orf69P3-201ENST00000565542 1120 ntBASIC20.59■□□□□ 0.89
ACTN4O43707 AC010653.2-201ENST00000623505 997 ntBASIC20.59■□□□□ 0.89
ACTN4O43707 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.59■□□□□ 0.89
ACTN4O43707 AP006294.2-201ENST00000641667 209 ntBASIC20.59■□□□□ 0.89
ACTN4O43707 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
ACTN4O43707 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTN4O43707 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTN4O43707 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.59■□□□□ 0.89
ACTN4O43707 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTN4O43707 LINC01126-201ENST00000623515 1646 ntBASIC20.59■□□□□ 0.89
ACTN4O43707 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ACTN4O43707 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ACTN4O43707 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ACTN4O43707 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.59■□□□□ 0.89
ACTN4O43707 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ACTN4O43707 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.59■□□□□ 0.89
ACTN4O43707 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.58■□□□□ 0.89
ACTN4O43707 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.58■□□□□ 0.89
ACTN4O43707 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 KRT17P2-201ENST00000300992 1314 ntBASIC20.58■□□□□ 0.89
ACTN4O43707 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.58■□□□□ 0.89
ACTN4O43707 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ACTN4O43707 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
ACTN4O43707 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.58■□□□□ 0.89
ACTN4O43707 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.58■□□□□ 0.89
ACTN4O43707 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.58■□□□□ 0.89
ACTN4O43707 AC104390.1-201ENST00000555663 520 ntBASIC20.58■□□□□ 0.89
ACTN4O43707 MIR4497-201ENST00000583208 89 ntBASIC20.58■□□□□ 0.89
ACTN4O43707 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ACTN4O43707 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.58■□□□□ 0.89
ACTN4O43707 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.58■□□□□ 0.88
ACTN4O43707 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ACTN4O43707 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ACTN4O43707 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ACTN4O43707 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
ACTN4O43707 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
ACTN4O43707 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ACTN4O43707 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ACTN4O43707 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.58■□□□□ 0.88
ACTN4O43707 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ACTN4O43707 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ACTN4O43707 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.57■□□□□ 0.88
ACTN4O43707 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.57■□□□□ 0.88
ACTN4O43707 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ACTN4O43707 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ACTN4O43707 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.57■□□□□ 0.88
ACTN4O43707 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.57■□□□□ 0.88
ACTN4O43707 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.57■□□□□ 0.88
ACTN4O43707 EGLN1P1-201ENST00000531623 762 ntBASIC20.57■□□□□ 0.88
ACTN4O43707 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.57■□□□□ 0.88
ACTN4O43707 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 AC010947.1-201ENST00000623454 693 ntBASIC20.57■□□□□ 0.88
ACTN4O43707 AC112497.1-201ENST00000624824 639 ntBASIC20.57■□□□□ 0.88
ACTN4O43707 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.57■□□□□ 0.88
ACTN4O43707 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.57■□□□□ 0.88
ACTN4O43707 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.57■□□□□ 0.88
ACTN4O43707 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ACTN4O43707 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.57■□□□□ 0.88
ACTN4O43707 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ACTN4O43707 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.57■□□□□ 0.88
ACTN4O43707 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.57■□□□□ 0.88
ACTN4O43707 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms