Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LDB2O43679 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.35■□□□□ 0.53
LDB2O43679 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.35■□□□□ 0.53
LDB2O43679 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.35■□□□□ 0.53
LDB2O43679 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.35■□□□□ 0.53
LDB2O43679 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
LDB2O43679 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.35■□□□□ 0.53
LDB2O43679 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.35■□□□□ 0.53
LDB2O43679 AL441883.1-201ENST00000566170 1045 ntBASIC18.35■□□□□ 0.53
LDB2O43679 AC010331.1-201ENST00000611423 582 ntBASIC18.35■□□□□ 0.53
LDB2O43679 AL157888.1-201ENST00000631930 593 ntBASIC18.35■□□□□ 0.53
LDB2O43679 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.35■□□□□ 0.53
LDB2O43679 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LDB2O43679 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LDB2O43679 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDB2O43679 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDB2O43679 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.34■□□□□ 0.53
LDB2O43679 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
LDB2O43679 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.34■□□□□ 0.53
LDB2O43679 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LDB2O43679 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
LDB2O43679 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LDB2O43679 AL096828.2-201ENST00000567259 1965 ntBASIC18.34■□□□□ 0.53
LDB2O43679 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDB2O43679 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDB2O43679 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDB2O43679 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
LDB2O43679 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LDB2O43679 BX664615.1-201ENST00000443558 458 ntBASIC18.34■□□□□ 0.53
LDB2O43679 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.34■□□□□ 0.53
LDB2O43679 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.34■□□□□ 0.53
LDB2O43679 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.34■□□□□ 0.53
LDB2O43679 AL031432.5-201ENST00000641059 760 ntBASIC18.34■□□□□ 0.53
LDB2O43679 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LDB2O43679 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.34■□□□□ 0.53
LDB2O43679 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LDB2O43679 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.34■□□□□ 0.53
LDB2O43679 REXO1L9P-201ENST00000604264 2108 ntBASIC18.34■□□□□ 0.53
LDB2O43679 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LDB2O43679 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LDB2O43679 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LDB2O43679 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.33■□□□□ 0.53
LDB2O43679 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LDB2O43679 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LDB2O43679 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LDB2O43679 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
LDB2O43679 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LDB2O43679 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LDB2O43679 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LDB2O43679 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LDB2O43679 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LDB2O43679 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LDB2O43679 RCN1P1-201ENST00000400413 996 ntBASIC18.33■□□□□ 0.52
LDB2O43679 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.33■□□□□ 0.52
LDB2O43679 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.33■□□□□ 0.52
LDB2O43679 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.33■□□□□ 0.52
LDB2O43679 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LDB2O43679 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.33■□□□□ 0.52
LDB2O43679 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.33■□□□□ 0.52
LDB2O43679 AC140113.3-201ENST00000605663 199 ntBASIC18.33■□□□□ 0.52
LDB2O43679 AC139887.4-201ENST00000607877 719 ntBASIC18.33■□□□□ 0.52
LDB2O43679 AC011558.1-201ENST00000623459 338 ntBASIC18.33■□□□□ 0.52
LDB2O43679 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LDB2O43679 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.33■□□□□ 0.52
LDB2O43679 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LDB2O43679 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LDB2O43679 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LDB2O43679 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.33■□□□□ 0.52
LDB2O43679 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LDB2O43679 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LDB2O43679 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.33■□□□□ 0.52
LDB2O43679 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LDB2O43679 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LDB2O43679 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
LDB2O43679 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.32■□□□□ 0.52
LDB2O43679 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.32■□□□□ 0.52
LDB2O43679 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.32■□□□□ 0.52
LDB2O43679 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LDB2O43679 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.32■□□□□ 0.52
LDB2O43679 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LDB2O43679 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.32■□□□□ 0.52
LDB2O43679 AC117947.1-201ENST00000427448 529 ntBASIC18.32■□□□□ 0.52
LDB2O43679 KRT18P57-201ENST00000443599 1254 ntBASIC18.32■□□□□ 0.52
LDB2O43679 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms