Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNPHO15079 EGLN1P1-201ENST00000531623 762 ntBASIC17.37■□□□□ 0.37
SNPHO15079 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.37■□□□□ 0.37
SNPHO15079 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SNPHO15079 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SNPHO15079 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNPHO15079 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
SNPHO15079 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNPHO15079 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNPHO15079 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNPHO15079 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.37■□□□□ 0.37
SNPHO15079 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNPHO15079 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNPHO15079 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SNPHO15079 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.37■□□□□ 0.37
SNPHO15079 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SNPHO15079 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.37■□□□□ 0.37
SNPHO15079 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNPHO15079 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SNPHO15079 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SNPHO15079 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.36■□□□□ 0.37
SNPHO15079 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.36■□□□□ 0.37
SNPHO15079 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
SNPHO15079 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SNPHO15079 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
SNPHO15079 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 AL691447.1-201ENST00000419456 387 ntBASIC17.36■□□□□ 0.37
SNPHO15079 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC17.36■□□□□ 0.37
SNPHO15079 SLC25A1P2-201ENST00000430693 912 ntBASIC17.36■□□□□ 0.37
SNPHO15079 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.36■□□□□ 0.37
SNPHO15079 AC007688.1-201ENST00000475592 759 ntBASIC17.36■□□□□ 0.37
SNPHO15079 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.36■□□□□ 0.37
SNPHO15079 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.36■□□□□ 0.37
SNPHO15079 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SNPHO15079 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.36■□□□□ 0.37
SNPHO15079 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.36■□□□□ 0.37
SNPHO15079 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.36■□□□□ 0.37
SNPHO15079 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.36■□□□□ 0.37
SNPHO15079 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SNPHO15079 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNPHO15079 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
SNPHO15079 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.35■□□□□ 0.37
SNPHO15079 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SNPHO15079 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SNPHO15079 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SNPHO15079 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.35■□□□□ 0.37
SNPHO15079 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.35■□□□□ 0.37
SNPHO15079 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNPHO15079 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SNPHO15079 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.35■□□□□ 0.37
SNPHO15079 CCR12P-201ENST00000446203 998 ntBASIC17.35■□□□□ 0.37
SNPHO15079 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.35■□□□□ 0.37
SNPHO15079 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.35■□□□□ 0.37
SNPHO15079 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.35■□□□□ 0.37
SNPHO15079 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC17.35■□□□□ 0.37
SNPHO15079 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.35■□□□□ 0.37
SNPHO15079 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.35■□□□□ 0.37
SNPHO15079 AC105148.1-201ENST00000604961 409 ntBASIC17.35■□□□□ 0.37
SNPHO15079 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
SNPHO15079 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 KRT18P22-201ENST00000402024 1347 ntBASIC17.35■□□□□ 0.37
SNPHO15079 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SNPHO15079 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SNPHO15079 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms