Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC31.25■■■□□ 2.59
CUX2O14529 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CUX2O14529 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CUX2O14529 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CUX2O14529 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC31.25■■■□□ 2.59
CUX2O14529 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC31.25■■■□□ 2.59
CUX2O14529 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC31.25■■■□□ 2.59
CUX2O14529 FAM86GP-201ENST00000448322 971 ntBASIC31.25■■■□□ 2.59
CUX2O14529 AC093214.1-201ENST00000511688 1107 ntBASIC31.25■■■□□ 2.59
CUX2O14529 AC006557.2-201ENST00000592985 1240 ntBASIC31.25■■■□□ 2.59
CUX2O14529 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC31.25■■■□□ 2.59
CUX2O14529 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CUX2O14529 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
CUX2O14529 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CUX2O14529 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CUX2O14529 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CUX2O14529 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC31.24■■■□□ 2.59
CUX2O14529 OARD1-208ENST00000469104 704 ntTSL 2 BASIC31.24■■■□□ 2.59
CUX2O14529 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC31.24■■■□□ 2.59
CUX2O14529 AC025678.2-201ENST00000562061 970 ntBASIC31.24■■■□□ 2.59
CUX2O14529 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC31.24■■■□□ 2.59
CUX2O14529 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC31.24■■■□□ 2.59
CUX2O14529 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
CUX2O14529 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
CUX2O14529 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC31.24■■■□□ 2.59
CUX2O14529 USP39-204ENST00000409766 2033 ntTSL 2 BASIC31.23■■■□□ 2.59
CUX2O14529 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CUX2O14529 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC31.23■■■□□ 2.59
CUX2O14529 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC31.23■■■□□ 2.59
CUX2O14529 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CUX2O14529 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC31.23■■■□□ 2.59
CUX2O14529 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CUX2O14529 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC31.23■■■□□ 2.59
CUX2O14529 RN7SL204P-201ENST00000582831 262 ntBASIC31.23■■■□□ 2.59
CUX2O14529 TK1-204ENST00000590430 683 ntTSL 3 BASIC31.23■■■□□ 2.59
CUX2O14529 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC31.23■■■□□ 2.59
CUX2O14529 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC31.23■■■□□ 2.59
CUX2O14529 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CUX2O14529 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CUX2O14529 MED17-221ENST00000639724 2317 ntTSL 5 BASIC31.23■■■□□ 2.59
CUX2O14529 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CUX2O14529 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CUX2O14529 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CUX2O14529 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CUX2O14529 HLA-DRB6-201ENST00000411500 1235 ntBASIC31.22■■■□□ 2.59
CUX2O14529 AC093520.2-201ENST00000561830 333 ntBASIC31.22■■■□□ 2.59
CUX2O14529 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC31.22■■■□□ 2.59
CUX2O14529 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC31.22■■■□□ 2.59
CUX2O14529 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC31.22■■■□□ 2.59
CUX2O14529 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CUX2O14529 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
CUX2O14529 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CUX2O14529 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CUX2O14529 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CUX2O14529 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CUX2O14529 AP002414.1-201ENST00000391405 1147 ntBASIC31.21■■■□□ 2.59
CUX2O14529 AC136632.2-201ENST00000512891 861 ntBASIC31.21■■■□□ 2.59
CUX2O14529 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC31.21■■■□□ 2.59
CUX2O14529 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC31.21■■■□□ 2.59
CUX2O14529 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC31.21■■■□□ 2.59
CUX2O14529 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CUX2O14529 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CUX2O14529 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC31.21■■■□□ 2.59
CUX2O14529 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CUX2O14529 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC31.21■■■□□ 2.59
CUX2O14529 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC31.21■■■□□ 2.59
CUX2O14529 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC31.21■■■□□ 2.59
CUX2O14529 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CUX2O14529 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC31.21■■■□□ 2.59
CUX2O14529 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CUX2O14529 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC31.21■■■□□ 2.59
CUX2O14529 ACTG1P14-201ENST00000446382 1122 ntBASIC31.21■■■□□ 2.59
CUX2O14529 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC31.21■■■□□ 2.59
CUX2O14529 AC004835.2-201ENST00000603762 682 ntBASIC31.21■■■□□ 2.59
CUX2O14529 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
CUX2O14529 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC31.2■■■□□ 2.59
CUX2O14529 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC31.2■■■□□ 2.59
CUX2O14529 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CUX2O14529 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CUX2O14529 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC31.2■■■□□ 2.59
CUX2O14529 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CUX2O14529 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CUX2O14529 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC31.2■■■□□ 2.59
CUX2O14529 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
CUX2O14529 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CUX2O14529 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
CUX2O14529 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CUX2O14529 AP005018.1-201ENST00000525475 301 ntBASIC31.2■■■□□ 2.58
CUX2O14529 CR383656.12-201ENST00000549567 513 ntBASIC31.2■■■□□ 2.58
CUX2O14529 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC31.2■■■□□ 2.58
CUX2O14529 CITED2-204ENST00000618718 901 ntTSL 2 BASIC31.2■■■□□ 2.58
CUX2O14529 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC31.19■■■□□ 2.58
CUX2O14529 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CUX2O14529 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC31.19■■■□□ 2.58
CUX2O14529 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CUX2O14529 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
CUX2O14529 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC31.19■■■□□ 2.58
CUX2O14529 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CUX2O14529 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CUX2O14529 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms