Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SOX1O00570 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SOX1O00570 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SOX1O00570 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SOX1O00570 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX1O00570 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX1O00570 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SOX1O00570 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SOX1O00570 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX1O00570 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.45■□□□□ 0.7
SOX1O00570 HCG4B-203ENST00000450128 991 ntBASIC19.45■□□□□ 0.7
SOX1O00570 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.45■□□□□ 0.7
SOX1O00570 AC006557.2-201ENST00000592985 1240 ntBASIC19.45■□□□□ 0.7
SOX1O00570 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SOX1O00570 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX1O00570 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.45■□□□□ 0.7
SOX1O00570 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX1O00570 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.45■□□□□ 0.7
SOX1O00570 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.45■□□□□ 0.7
SOX1O00570 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX1O00570 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SOX1O00570 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.44■□□□□ 0.7
SOX1O00570 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SOX1O00570 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
SOX1O00570 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.44■□□□□ 0.7
SOX1O00570 AL357033.4-201ENST00000617703 1807 ntBASIC19.44■□□□□ 0.7
SOX1O00570 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SOX1O00570 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.44■□□□□ 0.7
SOX1O00570 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SOX1O00570 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
SOX1O00570 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.44■□□□□ 0.7
SOX1O00570 AC004461.1-201ENST00000412461 403 ntBASIC19.44■□□□□ 0.7
SOX1O00570 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 FAM86GP-201ENST00000448322 971 ntBASIC19.44■□□□□ 0.7
SOX1O00570 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.44■□□□□ 0.7
SOX1O00570 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.44■□□□□ 0.7
SOX1O00570 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.44■□□□□ 0.7
SOX1O00570 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.44■□□□□ 0.7
SOX1O00570 AL513210.1-201ENST00000629608 234 ntBASIC19.44■□□□□ 0.7
SOX1O00570 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.44■□□□□ 0.7
SOX1O00570 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.44■□□□□ 0.7
SOX1O00570 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SOX1O00570 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.44■□□□□ 0.7
SOX1O00570 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.44■□□□□ 0.7
SOX1O00570 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.44■□□□□ 0.7
SOX1O00570 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SOX1O00570 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SOX1O00570 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.44■□□□□ 0.7
SOX1O00570 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOX1O00570 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOX1O00570 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SOX1O00570 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.43■□□□□ 0.7
SOX1O00570 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOX1O00570 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.43■□□□□ 0.7
SOX1O00570 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SOX1O00570 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.43■□□□□ 0.7
SOX1O00570 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.43■□□□□ 0.7
SOX1O00570 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOX1O00570 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.43■□□□□ 0.7
SOX1O00570 VN2R19P-201ENST00000442399 1052 ntBASIC19.43■□□□□ 0.7
SOX1O00570 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.43■□□□□ 0.7
SOX1O00570 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.43■□□□□ 0.7
SOX1O00570 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.43■□□□□ 0.7
SOX1O00570 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.43■□□□□ 0.7
SOX1O00570 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOX1O00570 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SOX1O00570 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOX1O00570 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.43■□□□□ 0.7
SOX1O00570 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.43■□□□□ 0.7
SOX1O00570 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SOX1O00570 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SOX1O00570 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOX1O00570 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SOX1O00570 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SOX1O00570 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.42■□□□□ 0.7
SOX1O00570 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.42■□□□□ 0.7
SOX1O00570 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.42■□□□□ 0.7
SOX1O00570 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms