Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
EIF3FO00303 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.95■□□□□ 0.46
EIF3FO00303 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.95■□□□□ 0.46
EIF3FO00303 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
EIF3FO00303 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.94■□□□□ 0.46
EIF3FO00303 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.94■□□□□ 0.46
EIF3FO00303 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.94■□□□□ 0.46
EIF3FO00303 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
EIF3FO00303 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.94■□□□□ 0.46
EIF3FO00303 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.94■□□□□ 0.46
EIF3FO00303 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.94■□□□□ 0.46
EIF3FO00303 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
EIF3FO00303 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
EIF3FO00303 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.94■□□□□ 0.46
EIF3FO00303 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.94■□□□□ 0.46
EIF3FO00303 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.94■□□□□ 0.46
EIF3FO00303 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
EIF3FO00303 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
EIF3FO00303 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EIF3FO00303 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EIF3FO00303 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
EIF3FO00303 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.93■□□□□ 0.46
EIF3FO00303 AL024508.2-201ENST00000607749 1894 ntBASIC17.93■□□□□ 0.46
EIF3FO00303 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
EIF3FO00303 AC073508.3-201ENST00000619697 1419 ntBASIC17.93■□□□□ 0.46
EIF3FO00303 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
EIF3FO00303 TERF1P1-201ENST00000311003 1181 ntBASIC17.93■□□□□ 0.46
EIF3FO00303 AL137013.1-201ENST00000432946 1228 ntBASIC17.93■□□□□ 0.46
EIF3FO00303 SLC25A6P5-201ENST00000435663 894 ntBASIC17.93■□□□□ 0.46
EIF3FO00303 BX664615.1-201ENST00000443558 458 ntBASIC17.93■□□□□ 0.46
EIF3FO00303 COX11P1-201ENST00000489116 835 ntBASIC17.93■□□□□ 0.46
EIF3FO00303 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.93■□□□□ 0.46
EIF3FO00303 AC010203.1-204ENST00000548782 407 ntBASIC17.93■□□□□ 0.46
EIF3FO00303 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.93■□□□□ 0.46
EIF3FO00303 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.93■□□□□ 0.46
EIF3FO00303 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EIF3FO00303 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
EIF3FO00303 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
EIF3FO00303 AC005332.8-201ENST00000622750 2735 ntBASIC17.93■□□□□ 0.46
EIF3FO00303 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.93■□□□□ 0.46
EIF3FO00303 PHGDH-209ENST00000641074 1780 ntBASIC17.93■□□□□ 0.46
EIF3FO00303 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.93■□□□□ 0.46
EIF3FO00303 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
EIF3FO00303 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EIF3FO00303 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EIF3FO00303 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EIF3FO00303 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EIF3FO00303 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
EIF3FO00303 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.92■□□□□ 0.46
EIF3FO00303 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.92■□□□□ 0.46
EIF3FO00303 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
EIF3FO00303 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
EIF3FO00303 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.92■□□□□ 0.46
EIF3FO00303 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
EIF3FO00303 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.92■□□□□ 0.46
EIF3FO00303 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
EIF3FO00303 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 AC093010.1-201ENST00000473625 1624 ntBASIC17.92■□□□□ 0.46
EIF3FO00303 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.92■□□□□ 0.46
EIF3FO00303 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.92■□□□□ 0.46
EIF3FO00303 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
EIF3FO00303 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.92■□□□□ 0.46
EIF3FO00303 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
EIF3FO00303 LINC01023-201ENST00000606054 436 ntBASIC17.92■□□□□ 0.46
EIF3FO00303 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
EIF3FO00303 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.92■□□□□ 0.46
EIF3FO00303 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.92■□□□□ 0.46
EIF3FO00303 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.92■□□□□ 0.46
EIF3FO00303 FLJ13224-201ENST00000313737 1514 ntBASIC17.92■□□□□ 0.46
EIF3FO00303 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
EIF3FO00303 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EIF3FO00303 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EIF3FO00303 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EIF3FO00303 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
EIF3FO00303 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
EIF3FO00303 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms