Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CLIC1O00299 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.33■□□□□ 0.36
CLIC1O00299 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.33■□□□□ 0.36
CLIC1O00299 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.33■□□□□ 0.36
CLIC1O00299 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.33■□□□□ 0.36
CLIC1O00299 DGCR10-201ENST00000609839 495 ntBASIC17.33■□□□□ 0.36
CLIC1O00299 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.33■□□□□ 0.36
CLIC1O00299 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.33■□□□□ 0.36
CLIC1O00299 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.33■□□□□ 0.36
CLIC1O00299 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.33■□□□□ 0.36
CLIC1O00299 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLIC1O00299 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
CLIC1O00299 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLIC1O00299 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLIC1O00299 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.33■□□□□ 0.36
CLIC1O00299 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CLIC1O00299 PHGDH-209ENST00000641074 1780 ntBASIC17.33■□□□□ 0.36
CLIC1O00299 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.33■□□□□ 0.36
CLIC1O00299 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CLIC1O00299 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.32■□□□□ 0.36
CLIC1O00299 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLIC1O00299 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.32■□□□□ 0.36
CLIC1O00299 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLIC1O00299 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CLIC1O00299 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLIC1O00299 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.32■□□□□ 0.36
CLIC1O00299 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
CLIC1O00299 AC116562.2-201ENST00000507042 360 ntBASIC17.32■□□□□ 0.36
CLIC1O00299 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CLIC1O00299 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLIC1O00299 AC020916.1-201ENST00000587762 1774 ntBASIC17.32■□□□□ 0.36
CLIC1O00299 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CLIC1O00299 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLIC1O00299 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.32■□□□□ 0.36
CLIC1O00299 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.32■□□□□ 0.36
CLIC1O00299 OR6D1P-202ENST00000641007 5290 ntBASIC17.32■□□□□ 0.36
CLIC1O00299 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC1O00299 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC1O00299 AC099343.3-201ENST00000605834 2503 ntBASIC17.31■□□□□ 0.36
CLIC1O00299 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLIC1O00299 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLIC1O00299 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIC1O00299 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIC1O00299 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLIC1O00299 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLIC1O00299 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLIC1O00299 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CLIC1O00299 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIC1O00299 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC1O00299 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLIC1O00299 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLIC1O00299 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 CA15P1-201ENST00000481698 905 ntBASIC17.31■□□□□ 0.36
CLIC1O00299 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.31■□□□□ 0.36
CLIC1O00299 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC1O00299 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC1O00299 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC1O00299 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.31■□□□□ 0.36
CLIC1O00299 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.31■□□□□ 0.36
CLIC1O00299 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLIC1O00299 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC1O00299 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms