Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
AP4M1O00189 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
AP4M1O00189 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4M1O00189 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.16■□□□□ 0.02
AP4M1O00189 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 AC011506.1-201ENST00000474329 610 ntBASIC15.16■□□□□ 0.02
AP4M1O00189 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4M1O00189 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.16■□□□□ 0.02
AP4M1O00189 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.16■□□□□ 0.02
AP4M1O00189 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 AC130371.2-201ENST00000619443 611 ntBASIC15.16■□□□□ 0.02
AP4M1O00189 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4M1O00189 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4M1O00189 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
AP4M1O00189 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
AP4M1O00189 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC15.16■□□□□ 0.02
AP4M1O00189 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
AP4M1O00189 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.16■□□□□ 0.02
AP4M1O00189 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
AP4M1O00189 AC104417.2-201ENST00000562989 1793 ntBASIC15.16■□□□□ 0.02
AP4M1O00189 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
AP4M1O00189 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
AP4M1O00189 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.15■□□□□ 0.02
AP4M1O00189 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
AP4M1O00189 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
AP4M1O00189 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
AP4M1O00189 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.15■□□□□ 0.02
AP4M1O00189 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
AP4M1O00189 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
AP4M1O00189 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
AP4M1O00189 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 MESTP1-201ENST00000404287 994 ntBASIC15.15■□□□□ 0.02
AP4M1O00189 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.15■□□□□ 0.02
AP4M1O00189 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.15■□□□□ 0.02
AP4M1O00189 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.15■□□□□ 0.02
AP4M1O00189 AP000692.2-201ENST00000608391 879 ntBASIC15.15■□□□□ 0.02
AP4M1O00189 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.15■□□□□ 0.02
AP4M1O00189 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.15■□□□□ 0.02
AP4M1O00189 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.15■□□□□ 0.02
AP4M1O00189 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.15■□□□□ 0.02
AP4M1O00189 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
AP4M1O00189 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
AP4M1O00189 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4M1O00189 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4M1O00189 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4M1O00189 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4M1O00189 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4M1O00189 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4M1O00189 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4M1O00189 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4M1O00189 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4M1O00189 MMP23A-201ENST00000234610 1017 ntBASIC15.14■□□□□ 0.01
AP4M1O00189 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
AP4M1O00189 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4M1O00189 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4M1O00189 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4M1O00189 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4M1O00189 AC091390.4-202ENST00000476426 537 ntBASIC15.14■□□□□ 0.01
AP4M1O00189 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
AP4M1O00189 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4M1O00189 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.14■□□□□ 0.01
AP4M1O00189 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4M1O00189 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4M1O00189 AP000525.1-201ENST00000608286 694 ntBASIC15.14■□□□□ 0.01
AP4M1O00189 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
AP4M1O00189 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
AP4M1O00189 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.14■□□□□ 0.01
AP4M1O00189 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4M1O00189 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4M1O00189 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4M1O00189 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4M1O00189 AL162727.3-201ENST00000635661 2787 ntBASIC15.14■□□□□ 0.01
AP4M1O00189 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4M1O00189 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4M1O00189 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms