Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 FLJ13224-201ENST00000313737 1514 ntBASIC13.44□□□□□ -0.26
SMKR1H3BMG3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.44□□□□□ -0.26
SMKR1H3BMG3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 ZNRF2P3-201ENST00000424200 374 ntBASIC13.43□□□□□ -0.26
SMKR1H3BMG3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.43□□□□□ -0.26
SMKR1H3BMG3 AC034268.1-201ENST00000441047 882 ntBASIC13.43□□□□□ -0.26
SMKR1H3BMG3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 AL357033.4-201ENST00000617703 1807 ntBASIC13.43□□□□□ -0.26
SMKR1H3BMG3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SMKR1H3BMG3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.42□□□□□ -0.26
SMKR1H3BMG3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms