Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 AC012306.2-201ENST00000609350 630 ntBASIC16.24■□□□□ 0.19
NPIPB4C9JG80 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 AC097493.4-201ENST00000641197 219 ntBASIC16.24■□□□□ 0.19
NPIPB4C9JG80 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.24■□□□□ 0.19
NPIPB4C9JG80 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.24■□□□□ 0.19
NPIPB4C9JG80 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.23■□□□□ 0.19
NPIPB4C9JG80 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
NPIPB4C9JG80 KRT89P-201ENST00000620027 1478 ntBASIC16.22■□□□□ 0.19
NPIPB4C9JG80 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.22■□□□□ 0.19
NPIPB4C9JG80 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 AC113404.2-201ENST00000507884 177 ntBASIC16.22■□□□□ 0.19
NPIPB4C9JG80 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 AC073912.3-201ENST00000624414 853 ntBASIC16.22■□□□□ 0.19
NPIPB4C9JG80 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 KRT18P55-202ENST00000578578 1546 ntBASIC16.22■□□□□ 0.19
NPIPB4C9JG80 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.22■□□□□ 0.19
NPIPB4C9JG80 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NPIPB4C9JG80 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NPIPB4C9JG80 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms