Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTL1A6NKG5 MTCL1P1-201ENST00000446207 792 ntBASIC24.29■■□□□ 1.48
RTL1A6NKG5 FAM197Y8-203ENST00000450145 560 ntBASIC24.29■■□□□ 1.48
RTL1A6NKG5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC24.29■■□□□ 1.48
RTL1A6NKG5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC24.29■■□□□ 1.48
RTL1A6NKG5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RTL1A6NKG5 AC009533.2-201ENST00000543664 586 ntBASIC24.29■■□□□ 1.48
RTL1A6NKG5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC24.29■■□□□ 1.48
RTL1A6NKG5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTL1A6NKG5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.28■■□□□ 1.48
RTL1A6NKG5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC24.28■■□□□ 1.48
RTL1A6NKG5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTL1A6NKG5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RTL1A6NKG5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTL1A6NKG5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC24.28■■□□□ 1.48
RTL1A6NKG5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.28■■□□□ 1.48
RTL1A6NKG5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RTL1A6NKG5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTL1A6NKG5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTL1A6NKG5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RTL1A6NKG5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
RTL1A6NKG5 LINC01126-201ENST00000623515 1646 ntBASIC24.28■■□□□ 1.48
RTL1A6NKG5 INTS4P1-201ENST00000438455 1935 ntBASIC24.28■■□□□ 1.48
RTL1A6NKG5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RTL1A6NKG5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTL1A6NKG5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTL1A6NKG5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RTL1A6NKG5 AC125634.1-201ENST00000438758 1403 ntBASIC24.28■■□□□ 1.48
RTL1A6NKG5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
RTL1A6NKG5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTL1A6NKG5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC24.28■■□□□ 1.48
RTL1A6NKG5 AP001269.4-201ENST00000609611 512 ntBASIC24.28■■□□□ 1.48
RTL1A6NKG5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC24.27■■□□□ 1.48
RTL1A6NKG5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL1A6NKG5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL1A6NKG5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC24.27■■□□□ 1.48
RTL1A6NKG5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC24.27■■□□□ 1.48
RTL1A6NKG5 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC24.27■■□□□ 1.48
RTL1A6NKG5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTL1A6NKG5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL1A6NKG5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL1A6NKG5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL1A6NKG5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC24.27■■□□□ 1.48
RTL1A6NKG5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTL1A6NKG5 AL031284.1-201ENST00000419297 478 ntBASIC24.27■■□□□ 1.48
RTL1A6NKG5 AL590627.1-203ENST00000421194 1026 ntBASIC24.27■■□□□ 1.48
RTL1A6NKG5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
RTL1A6NKG5 AF186996.4-201ENST00000467186 377 ntBASIC24.27■■□□□ 1.48
RTL1A6NKG5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC24.27■■□□□ 1.48
RTL1A6NKG5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC24.27■■□□□ 1.48
RTL1A6NKG5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTL1A6NKG5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
RTL1A6NKG5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC24.26■■□□□ 1.47
RTL1A6NKG5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTL1A6NKG5 IL9RP2-201ENST00000423948 1312 ntBASIC24.26■■□□□ 1.47
RTL1A6NKG5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC24.26■■□□□ 1.47
RTL1A6NKG5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTL1A6NKG5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC24.26■■□□□ 1.47
RTL1A6NKG5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
RTL1A6NKG5 MOK-208ENST00000519058 917 ntTSL 2 BASIC24.26■■□□□ 1.47
RTL1A6NKG5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC24.26■■□□□ 1.47
RTL1A6NKG5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC24.26■■□□□ 1.47
RTL1A6NKG5 AC148477.8-201ENST00000624298 468 ntBASIC24.26■■□□□ 1.47
RTL1A6NKG5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTL1A6NKG5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
RTL1A6NKG5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTL1A6NKG5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTL1A6NKG5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC24.25■■□□□ 1.47
RTL1A6NKG5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTL1A6NKG5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTL1A6NKG5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTL1A6NKG5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTL1A6NKG5 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
RTL1A6NKG5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC24.25■■□□□ 1.47
RTL1A6NKG5 PMS2P1-201ENST00000431037 1228 ntBASIC24.25■■□□□ 1.47
RTL1A6NKG5 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTL1A6NKG5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC24.25■■□□□ 1.47
RTL1A6NKG5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC24.25■■□□□ 1.47
RTL1A6NKG5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC24.25■■□□□ 1.47
RTL1A6NKG5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTL1A6NKG5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
RTL1A6NKG5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL1A6NKG5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL1A6NKG5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC24.24■■□□□ 1.47
RTL1A6NKG5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL1A6NKG5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC24.24■■□□□ 1.47
RTL1A6NKG5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL1A6NKG5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC24.24■■□□□ 1.47
RTL1A6NKG5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC24.24■■□□□ 1.47
RTL1A6NKG5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
RTL1A6NKG5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC24.24■■□□□ 1.47
RTL1A6NKG5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL1A6NKG5 AC132008.2-207ENST00000454517 770 ntBASIC24.24■■□□□ 1.47
RTL1A6NKG5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC24.24■■□□□ 1.47
RTL1A6NKG5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL1A6NKG5 NME4-212ENST00000621774 904 ntTSL 3 BASIC24.24■■□□□ 1.47
RTL1A6NKG5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
RTL1A6NKG5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTL1A6NKG5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
RTL1A6NKG5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms