Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV3S1A0A5B6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 AC093010.1-201ENST00000473625 1624 ntBASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 AL355312.1-201ENST00000407115 2176 ntBASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
TCRBV3S1A0A5B6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 AC004264.1-201ENST00000608354 794 ntBASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 AC073111.5-205ENST00000641717 521 ntBASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
TCRBV3S1A0A5B6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms