Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TCRBV7S3A2A0A539 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 LINC01126-201ENST00000623515 1646 ntBASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 AC009102.3-201ENST00000623118 1491 ntBASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TCRBV7S3A2A0A539 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 AC012317.2-201ENST00000623305 2251 ntBASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 MIR149-201ENST00000384879 89 ntBASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 KRT18P23-201ENST00000435622 1283 ntBASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 HOXB1-202ENST00000577092 1414 ntBASIC18.66■□□□□ 0.58
TCRBV7S3A2A0A539 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 UNC93B2-201ENST00000285383 730 ntBASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 AC008550.1-201ENST00000511500 884 ntBASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 AC092338.2-201ENST00000568827 1415 ntBASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TCRBV7S3A2A0A539 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TCRBV7S3A2A0A539 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms