Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHB9Q9Y5E1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 MYLKP1-201ENST00000509077 1580 ntBASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHB9Q9Y5E1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB9Q9Y5E1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHB9Q9Y5E1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 AC005082.1-201ENST00000413042 2259 ntBASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 AL845331.1-201ENST00000424978 1190 ntBASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 AC034232.1-201ENST00000506026 1064 ntBASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 MIR3917-201ENST00000580971 93 ntBASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 HYMAI.1-201ENST00000620949 238 ntBASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 AC126763.1-201ENST00000552015 2118 ntBASIC18.64■□□□□ 0.57
PCDHB9Q9Y5E1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 AL157888.1-201ENST00000631930 593 ntBASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHB9Q9Y5E1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHB9Q9Y5E1 AL645929.1-201ENST00000420084 975 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms