Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VPS29Q9UBQ0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 AC009102.3-201ENST00000623118 1491 ntBASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 MIR149-201ENST00000384879 89 ntBASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 SDHAP2-201ENST00000455183 2001 ntBASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.63■□□□□ 0.41
VPS29Q9UBQ0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 AC099343.3-201ENST00000605834 2503 ntBASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 AC128688.1-201ENST00000487626 519 ntBASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 REXO1L9P-201ENST00000604264 2108 ntBASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
VPS29Q9UBQ0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 TSPY15P-201ENST00000457163 923 ntBASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 AC112497.1-201ENST00000624824 639 ntBASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.61■□□□□ 0.41
VPS29Q9UBQ0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms