Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SDHAP2-201ENST00000455183 2001 ntBASIC17.8■□□□□ 0.44
CPNE7Q9UBL6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE7Q9UBL6 LETM1P2-201ENST00000597330 2178 ntBASIC17.8■□□□□ 0.44
CPNE7Q9UBL6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPNE7Q9UBL6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 AC090616.6-201ENST00000582640 721 ntBASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CPNE7Q9UBL6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 DUSP5P1-201ENST00000441325 1139 ntBASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 KRT126P-201ENST00000549467 1181 ntBASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 MIR3652-201ENST00000579335 131 ntBASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 AC008687.5-201ENST00000593746 558 ntBASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 IGHV3-41-201ENST00000613121 348 ntBASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPNE7Q9UBL6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 DRAXINP1-201ENST00000437611 948 ntBASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPNE7Q9UBL6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE7Q9UBL6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE7Q9UBL6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE7Q9UBL6 AL353692.3-201ENST00000407031 1396 ntBASIC17.77■□□□□ 0.43
CPNE7Q9UBL6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE7Q9UBL6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.77■□□□□ 0.43
CPNE7Q9UBL6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.77■□□□□ 0.43
CPNE7Q9UBL6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPNE7Q9UBL6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms