Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 OR10C1-204ENST00000622521 1039 ntBASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
COMMD3Q9UBI1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 AL023806.1-201ENST00000603994 1649 ntBASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COMMD3Q9UBI1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 AP001094.4-201ENST00000579008 2176 ntBASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 AL121906.2-201ENST00000621597 723 ntBASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 AC006557.6-201ENST00000623071 864 ntBASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms