Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 RCN1P2-201ENST00000398357 915 ntBASIC18.19■□□□□ 0.5
NCDNQ9UBB6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 AC004832.2-201ENST00000426397 482 ntBASIC18.19■□□□□ 0.5
NCDNQ9UBB6 RPS2P1-201ENST00000434010 821 ntBASIC18.19■□□□□ 0.5
NCDNQ9UBB6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 RNA5SP415-201ENST00000517246 115 ntBASIC18.19■□□□□ 0.5
NCDNQ9UBB6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 AP001269.4-201ENST00000609611 512 ntBASIC18.19■□□□□ 0.5
NCDNQ9UBB6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NCDNQ9UBB6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 FAM8A3P-201ENST00000427218 844 ntBASIC18.18■□□□□ 0.5
NCDNQ9UBB6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 KRT89P-201ENST00000620027 1478 ntBASIC18.18■□□□□ 0.5
NCDNQ9UBB6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
NCDNQ9UBB6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 SDHAP1-207ENST00000440850 2000 ntBASIC18.17■□□□□ 0.5
NCDNQ9UBB6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 OR7E14P-202ENST00000530490 1290 ntBASIC18.17■□□□□ 0.5
NCDNQ9UBB6 RFPL4AP1-201ENST00000530883 850 ntBASIC18.17■□□□□ 0.5
NCDNQ9UBB6 AC021087.4-201ENST00000563761 564 ntBASIC18.17■□□□□ 0.5
NCDNQ9UBB6 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.17■□□□□ 0.5
NCDNQ9UBB6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 292.3 ms