Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
COL20A1Q9P218 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.73■□□□□ 0.91
COL20A1Q9P218 EMBP1-201ENST00000458200 901 ntBASIC20.73■□□□□ 0.91
COL20A1Q9P218 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.73■□□□□ 0.91
COL20A1Q9P218 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.73■□□□□ 0.91
COL20A1Q9P218 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.73■□□□□ 0.91
COL20A1Q9P218 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COL20A1Q9P218 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.73■□□□□ 0.91
COL20A1Q9P218 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL20A1Q9P218 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL20A1Q9P218 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.73■□□□□ 0.91
COL20A1Q9P218 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL20A1Q9P218 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
COL20A1Q9P218 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
COL20A1Q9P218 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
COL20A1Q9P218 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.72■□□□□ 0.91
COL20A1Q9P218 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.72■□□□□ 0.91
COL20A1Q9P218 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.72■□□□□ 0.91
COL20A1Q9P218 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.72■□□□□ 0.91
COL20A1Q9P218 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL20A1Q9P218 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL20A1Q9P218 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.72■□□□□ 0.91
COL20A1Q9P218 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL20A1Q9P218 LINC00602-201ENST00000629776 2065 ntBASIC20.71■□□□□ 0.91
COL20A1Q9P218 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL20A1Q9P218 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL20A1Q9P218 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL20A1Q9P218 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL20A1Q9P218 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL20A1Q9P218 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL20A1Q9P218 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL20A1Q9P218 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.71■□□□□ 0.91
COL20A1Q9P218 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.71■□□□□ 0.91
COL20A1Q9P218 AC091304.2-201ENST00000564639 760 ntBASIC20.71■□□□□ 0.91
COL20A1Q9P218 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.71■□□□□ 0.91
COL20A1Q9P218 AL121772.3-201ENST00000610840 674 ntBASIC20.71■□□□□ 0.91
COL20A1Q9P218 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.71■□□□□ 0.91
COL20A1Q9P218 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL20A1Q9P218 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
COL20A1Q9P218 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.71■□□□□ 0.91
COL20A1Q9P218 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COL20A1Q9P218 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL20A1Q9P218 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.71■□□□□ 0.91
COL20A1Q9P218 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COL20A1Q9P218 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL20A1Q9P218 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
COL20A1Q9P218 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
COL20A1Q9P218 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.7■□□□□ 0.9
COL20A1Q9P218 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.7■□□□□ 0.9
COL20A1Q9P218 AC068472.1-201ENST00000474589 881 ntBASIC20.7■□□□□ 0.9
COL20A1Q9P218 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL20A1Q9P218 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL20A1Q9P218 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL20A1Q9P218 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL20A1Q9P218 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL20A1Q9P218 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 TSPY12P-201ENST00000421279 868 ntBASIC20.69■□□□□ 0.9
COL20A1Q9P218 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 AC011840.4-201ENST00000578471 627 ntBASIC20.69■□□□□ 0.9
COL20A1Q9P218 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL20A1Q9P218 AC005336.2-201ENST00000593183 939 ntBASIC20.69■□□□□ 0.9
COL20A1Q9P218 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL20A1Q9P218 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL20A1Q9P218 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 222 ms