Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 AC148477.8-201ENST00000624298 468 ntBASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDLIM7Q9NR12 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 RNPS1P1-201ENST00000507437 918 ntBASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 GUSBP12-201ENST00000513727 720 ntBASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 AL031598.1-201ENST00000561511 1773 ntBASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 BX323043.1-201ENST00000641006 1765 ntBASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
PDLIM7Q9NR12 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 AC243591.1-201ENST00000452967 1364 ntBASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 BX842568.4-201ENST00000421222 227 ntBASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 VENTXP7-201ENST00000475503 772 ntBASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDLIM7Q9NR12 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 AP000974.1-201ENST00000623909 2387 ntBASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 PMS2P7-201ENST00000506558 1336 ntBASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 AL499627.1-201ENST00000569373 2188 ntBASIC20.51■□□□□ 0.87
PDLIM7Q9NR12 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 AF186996.4-201ENST00000467186 377 ntBASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDLIM7Q9NR12 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.49■□□□□ 0.87
PDLIM7Q9NR12 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms