Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 AL353719.1-201ENST00000566847 864 ntBASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEUROD4Q9HD90 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 FITM1-202ENST00000559294 800 ntBASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 WWOX-216ENST00000569818 525 ntBASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 AC097493.4-201ENST00000641197 219 ntBASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 NOC2LP2-201ENST00000407594 1944 ntBASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NEUROD4Q9HD90 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 AP003041.3-201ENST00000527151 707 ntBASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 AC009065.1-201ENST00000564055 1225 ntBASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 C2orf69P3-201ENST00000565542 1120 ntBASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 AP000525.1-201ENST00000608286 694 ntBASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 AC116562.4-202ENST00000641738 218 ntBASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 GMCL1P1-201ENST00000463439 1581 ntBASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NEUROD4Q9HD90 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NEUROD4Q9HD90 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms