Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 DRAXINP1-201ENST00000437611 948 ntBASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 AP002414.4-201ENST00000589764 1148 ntBASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 LINC00167-201ENST00000530583 1419 ntBASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSNK1G1Q9HCP0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSNK1G1Q9HCP0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSNK1G1Q9HCP0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.14■□□□□ 0.66
CSNK1G1Q9HCP0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 AC092119.3-201ENST00000612618 583 ntBASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.14■□□□□ 0.65
CSNK1G1Q9HCP0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 GUSBP12-201ENST00000513727 720 ntBASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 TPSP2-201ENST00000561760 610 ntBASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 AL592071.1-201ENST00000611956 408 ntBASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CSNK1G1Q9HCP0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 PHGDH-209ENST00000641074 1780 ntBASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 KRT18P1-202ENST00000452408 1331 ntBASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 HCG4P8-203ENST00000443049 980 ntBASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 AC092329.2-201ENST00000598402 547 ntBASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 AL353801.3-201ENST00000609898 542 ntBASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 IGHV3-41-201ENST00000613121 348 ntBASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CSNK1G1Q9HCP0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms