Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDH9Q9HC56 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19■□□□□ 0.63
PCDH9Q9HC56 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH9Q9HC56 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH9Q9HC56 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH9Q9HC56 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH9Q9HC56 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDH9Q9HC56 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH9Q9HC56 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PCDH9Q9HC56 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19■□□□□ 0.63
PCDH9Q9HC56 AC092338.2-201ENST00000568827 1415 ntBASIC19■□□□□ 0.63
PCDH9Q9HC56 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 GPAT2P1-201ENST00000444924 1672 ntBASIC18.99■□□□□ 0.63
PCDH9Q9HC56 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 AC128688.1-201ENST00000487626 519 ntBASIC18.99■□□□□ 0.63
PCDH9Q9HC56 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH9Q9HC56 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 LINC01568-207ENST00000641790 1380 ntBASIC18.98■□□□□ 0.63
PCDH9Q9HC56 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 INGX-201ENST00000359239 846 ntBASIC18.98■□□□□ 0.63
PCDH9Q9HC56 AC007663.1-201ENST00000438948 1240 ntBASIC18.98■□□□□ 0.63
PCDH9Q9HC56 AP003041.3-201ENST00000527151 707 ntBASIC18.98■□□□□ 0.63
PCDH9Q9HC56 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 REXO1L9P-201ENST00000604264 2108 ntBASIC18.98■□□□□ 0.63
PCDH9Q9HC56 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH9Q9HC56 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 AC034236.2-201ENST00000606662 1610 ntBASIC18.97■□□□□ 0.63
PCDH9Q9HC56 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 KRT8P50-201ENST00000562022 1438 ntBASIC18.97■□□□□ 0.63
PCDH9Q9HC56 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDH9Q9HC56 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
PCDH9Q9HC56 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms