Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF39Q9H2S5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 ANKRD20A10P-201ENST00000457591 1515 ntBASIC20.43■□□□□ 0.86
RNF39Q9H2S5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 PCED1CP-201ENST00000419887 785 ntBASIC20.43■□□□□ 0.86
RNF39Q9H2S5 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 MCCD1P1-208ENST00000445732 328 ntBASIC20.43■□□□□ 0.86
RNF39Q9H2S5 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 AC121161.1-201ENST00000510606 652 ntBASIC20.43■□□□□ 0.86
RNF39Q9H2S5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 AC024243.1-201ENST00000609234 778 ntBASIC20.43■□□□□ 0.86
RNF39Q9H2S5 AC091076.1-201ENST00000610741 619 ntBASIC20.43■□□□□ 0.86
RNF39Q9H2S5 AL121956.5-201ENST00000625261 221 ntBASIC20.43■□□□□ 0.86
RNF39Q9H2S5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 FEM1AP3-201ENST00000403722 1741 ntBASIC20.43■□□□□ 0.86
RNF39Q9H2S5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 AP000866.2-201ENST00000504932 1493 ntTSL 2 BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF39Q9H2S5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 STARP1-201ENST00000397973 869 ntBASIC20.42■□□□□ 0.86
RNF39Q9H2S5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 UPK3BP1-201ENST00000428678 509 ntBASIC20.42■□□□□ 0.86
RNF39Q9H2S5 AL122001.1-201ENST00000457027 370 ntBASIC20.42■□□□□ 0.86
RNF39Q9H2S5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 AL731537.2-201ENST00000561565 951 ntBASIC20.42■□□□□ 0.86
RNF39Q9H2S5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 AC026979.4-201ENST00000606555 645 ntBASIC20.42■□□□□ 0.86
RNF39Q9H2S5 AL162574.2-201ENST00000614618 657 ntBASIC20.42■□□□□ 0.86
RNF39Q9H2S5 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.42■□□□□ 0.86
RNF39Q9H2S5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.41■□□□□ 0.86
RNF39Q9H2S5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 AL512353.2-201ENST00000448759 1962 ntBASIC20.41■□□□□ 0.86
RNF39Q9H2S5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 ANKRD26P4-201ENST00000455755 950 ntBASIC20.41■□□□□ 0.86
RNF39Q9H2S5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 MIR3180-5-201ENST00000583743 153 ntBASIC20.41■□□□□ 0.86
RNF39Q9H2S5 AC083849.1-201ENST00000615227 514 ntBASIC20.41■□□□□ 0.86
RNF39Q9H2S5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 OR5AC4P-202ENST00000642086 985 ntBASIC20.41■□□□□ 0.86
RNF39Q9H2S5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF39Q9H2S5 AC141586.3-201ENST00000562166 1838 ntBASIC20.41■□□□□ 0.86
RNF39Q9H2S5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms