Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.79■■□□□ 1.08
NBPF3Q9H094 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.79■■□□□ 1.08
NBPF3Q9H094 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.79■■□□□ 1.08
NBPF3Q9H094 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.79■■□□□ 1.08
NBPF3Q9H094 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.79■■□□□ 1.08
NBPF3Q9H094 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.79■■□□□ 1.08
NBPF3Q9H094 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF3Q9H094 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF3Q9H094 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF3Q9H094 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NBPF3Q9H094 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF3Q9H094 LINC01126-201ENST00000623515 1646 ntBASIC21.78■■□□□ 1.08
NBPF3Q9H094 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF3Q9H094 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NBPF3Q9H094 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF3Q9H094 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF3Q9H094 ZNF444P1-201ENST00000559497 298 ntBASIC21.78■■□□□ 1.08
NBPF3Q9H094 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.78■■□□□ 1.08
NBPF3Q9H094 AL136038.4-201ENST00000603606 1261 ntBASIC21.78■■□□□ 1.08
NBPF3Q9H094 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.78■■□□□ 1.08
NBPF3Q9H094 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF3Q9H094 LINC01311-201ENST00000565162 1445 ntBASIC21.78■■□□□ 1.08
NBPF3Q9H094 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF3Q9H094 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.78■■□□□ 1.08
NBPF3Q9H094 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.78■■□□□ 1.08
NBPF3Q9H094 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
NBPF3Q9H094 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NBPF3Q9H094 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF3Q9H094 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF3Q9H094 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
NBPF3Q9H094 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
NBPF3Q9H094 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
NBPF3Q9H094 ESPNP-201ENST00000270691 2015 ntBASIC21.77■■□□□ 1.08
NBPF3Q9H094 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF3Q9H094 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF3Q9H094 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF3Q9H094 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.77■■□□□ 1.08
NBPF3Q9H094 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.77■■□□□ 1.08
NBPF3Q9H094 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.77■■□□□ 1.08
NBPF3Q9H094 FDX1P1-201ENST00000449115 551 ntBASIC21.77■■□□□ 1.08
NBPF3Q9H094 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.77■■□□□ 1.08
NBPF3Q9H094 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NBPF3Q9H094 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.77■■□□□ 1.08
NBPF3Q9H094 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
NBPF3Q9H094 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF3Q9H094 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.77■■□□□ 1.08
NBPF3Q9H094 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF3Q9H094 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF3Q9H094 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF3Q9H094 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF3Q9H094 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF3Q9H094 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
NBPF3Q9H094 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NBPF3Q9H094 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.77■■□□□ 1.07
NBPF3Q9H094 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF3Q9H094 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
NBPF3Q9H094 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.76■■□□□ 1.07
NBPF3Q9H094 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF3Q9H094 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF3Q9H094 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF3Q9H094 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF3Q9H094 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.76■■□□□ 1.07
NBPF3Q9H094 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.76■■□□□ 1.07
NBPF3Q9H094 RN7SL510P-201ENST00000581311 263 ntBASIC21.76■■□□□ 1.07
NBPF3Q9H094 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.76■■□□□ 1.07
NBPF3Q9H094 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
NBPF3Q9H094 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF3Q9H094 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF3Q9H094 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.76■■□□□ 1.07
NBPF3Q9H094 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF3Q9H094 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.76■■□□□ 1.07
NBPF3Q9H094 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF3Q9H094 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF3Q9H094 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF3Q9H094 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.76■■□□□ 1.07
NBPF3Q9H094 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.75■■□□□ 1.07
NBPF3Q9H094 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NBPF3Q9H094 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF3Q9H094 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF3Q9H094 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.75■■□□□ 1.07
NBPF3Q9H094 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF3Q9H094 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.75■■□□□ 1.07
NBPF3Q9H094 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.75■■□□□ 1.07
NBPF3Q9H094 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.75■■□□□ 1.07
NBPF3Q9H094 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF3Q9H094 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF3Q9H094 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.75■■□□□ 1.07
NBPF3Q9H094 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF3Q9H094 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms