Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 AL121772.3-201ENST00000610840 674 ntBASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 AC120114.3-201ENST00000611923 658 ntBASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDK5RAP2Q96SN8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 FAAHP1-202ENST00000446499 1238 ntBASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.54■■□□□ 1.04
CDK5RAP2Q96SN8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 AL160237.2-201ENST00000556165 472 ntBASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDK5RAP2Q96SN8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 GMCL1P1-201ENST00000463439 1581 ntBASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 AL121912.1-201ENST00000603683 238 ntBASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CDK5RAP2Q96SN8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDK5RAP2Q96SN8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CDK5RAP2Q96SN8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.52■■□□□ 1.03
CDK5RAP2Q96SN8 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDK5RAP2Q96SN8 AC018712.1-201ENST00000455767 687 ntBASIC21.52■■□□□ 1.03
CDK5RAP2Q96SN8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDK5RAP2Q96SN8 AC112698.1-201ENST00000510299 916 ntBASIC21.52■■□□□ 1.03
CDK5RAP2Q96SN8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.52■■□□□ 1.03
CDK5RAP2Q96SN8 AC009154.2-201ENST00000621177 724 ntBASIC21.52■■□□□ 1.03
CDK5RAP2Q96SN8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 HLA-A-201ENST00000376802 1334 ntBASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 AC073592.3-201ENST00000625118 1834 ntBASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.51■■□□□ 1.03
CDK5RAP2Q96SN8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms