Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC42Q96M95 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC42Q96M95 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CCDC42Q96M95 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC42Q96M95 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC42Q96M95 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC42Q96M95 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC42Q96M95 AC006058.3-201ENST00000606217 1069 ntBASIC19.86■□□□□ 0.77
CCDC42Q96M95 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC42Q96M95 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC42Q96M95 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC42Q96M95 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC42Q96M95 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC42Q96M95 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCDC42Q96M95 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC42Q96M95 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC42Q96M95 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC42Q96M95 ID1-201ENST00000376105 1233 ntBASIC19.85■□□□□ 0.77
CCDC42Q96M95 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC42Q96M95 MIR564-202ENST00000385049 94 ntBASIC19.85■□□□□ 0.77
CCDC42Q96M95 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC42Q96M95 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC42Q96M95 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC42Q96M95 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC42Q96M95 AC011506.1-201ENST00000474329 610 ntBASIC19.85■□□□□ 0.77
CCDC42Q96M95 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC42Q96M95 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC42Q96M95 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC42Q96M95 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC42Q96M95 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC42Q96M95 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC42Q96M95 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC42Q96M95 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC42Q96M95 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 GMCL1P1-201ENST00000463439 1581 ntBASIC19.84■□□□□ 0.77
CCDC42Q96M95 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 AF186192.3-201ENST00000583427 947 ntBASIC19.84■□□□□ 0.77
CCDC42Q96M95 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 AC073195.1-201ENST00000607241 877 ntBASIC19.84■□□□□ 0.77
CCDC42Q96M95 MIR6786-201ENST00000616843 113 ntBASIC19.84■□□□□ 0.77
CCDC42Q96M95 AC008622.2-201ENST00000617006 1229 ntBASIC19.84■□□□□ 0.77
CCDC42Q96M95 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC42Q96M95 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC42Q96M95 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC42Q96M95 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC42Q96M95 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC42Q96M95 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC42Q96M95 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC42Q96M95 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC42Q96M95 AL096828.2-201ENST00000567259 1965 ntBASIC19.83■□□□□ 0.77
CCDC42Q96M95 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC42Q96M95 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CCDC42Q96M95 B3GAT3P1-201ENST00000471720 806 ntBASIC19.83■□□□□ 0.77
CCDC42Q96M95 C1QBPP2-201ENST00000528754 825 ntBASIC19.83■□□□□ 0.77
CCDC42Q96M95 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CCDC42Q96M95 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC42Q96M95 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC42Q96M95 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC42Q96M95 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC42Q96M95 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC42Q96M95 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC42Q96M95 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC42Q96M95 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC42Q96M95 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC42Q96M95 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC42Q96M95 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.83■□□□□ 0.76
CCDC42Q96M95 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC42Q96M95 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC42Q96M95 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC42Q96M95 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC42Q96M95 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC42Q96M95 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC42Q96M95 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC42Q96M95 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC42Q96M95 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC42Q96M95 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC42Q96M95 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms