Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 FAM8A6P-201ENST00000407496 1135 ntBASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 SPDYE15P-201ENST00000424157 909 ntBASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 KRT18P41-201ENST00000518924 1277 ntBASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CHMP4CQ96CF2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
CHMP4CQ96CF2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHMP4CQ96CF2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHMP4CQ96CF2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CHMP4CQ96CF2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHMP4CQ96CF2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CHMP4CQ96CF2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.89■■□□□ 1.1
CHMP4CQ96CF2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 AL357033.4-201ENST00000617703 1807 ntBASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
CHMP4CQ96CF2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 AC112907.2-201ENST00000448639 330 ntBASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 MIR3180-5-201ENST00000583743 153 ntBASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CHMP4CQ96CF2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 AC135050.7-201ENST00000624508 2218 ntBASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 AP000593.1-201ENST00000393668 712 ntBASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 AC092597.1-201ENST00000487352 616 ntBASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CHMP4CQ96CF2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms