Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 AC008687.5-201ENST00000593746 558 ntBASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM43Q96BQ3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM43Q96BQ3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM43Q96BQ3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.85■□□□□ 0.77
TRIM43Q96BQ3 AC064836.3-201ENST00000607928 673 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms