Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ECEL1P3-201ENST00000427961 737 ntBASIC17.68■□□□□ 0.42
UBE2E3Q969T4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 RNF165-205ENST00000588679 2904 ntBASIC17.68■□□□□ 0.42
UBE2E3Q969T4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 AC092865.7-201ENST00000641832 219 ntBASIC17.68■□□□□ 0.42
UBE2E3Q969T4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
UBE2E3Q969T4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 AL390961.4-201ENST00000623958 2535 ntBASIC17.67■□□□□ 0.42
UBE2E3Q969T4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 AC010240.3-201ENST00000607688 395 ntBASIC17.67■□□□□ 0.42
UBE2E3Q969T4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.67■□□□□ 0.42
UBE2E3Q969T4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 LIN28AP1-201ENST00000429574 405 ntBASIC17.66■□□□□ 0.42
UBE2E3Q969T4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBE2E3Q969T4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 SDHAP2-201ENST00000455183 2001 ntBASIC17.65■□□□□ 0.42
UBE2E3Q969T4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
UBE2E3Q969T4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms