Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CKAP2Q8WWK9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.27■□□□□ 0.52
CKAP2Q8WWK9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CKAP2Q8WWK9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CKAP2Q8WWK9 RCC2P3-201ENST00000418112 1537 ntBASIC18.27■□□□□ 0.51
CKAP2Q8WWK9 KRT18P55-202ENST00000578578 1546 ntBASIC18.27■□□□□ 0.51
CKAP2Q8WWK9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CKAP2Q8WWK9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CKAP2Q8WWK9 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CKAP2Q8WWK9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CKAP2Q8WWK9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CKAP2Q8WWK9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 AC091874.3-201ENST00000512672 1195 ntBASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CKAP2Q8WWK9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 MIPEPP3-201ENST00000412105 444 ntBASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 AL050303.2-201ENST00000619798 666 ntBASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CKAP2Q8WWK9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 PNMA6B-201ENST00000538162 1200 ntBASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CKAP2Q8WWK9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms