Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 VENTXP7-201ENST00000475503 772 ntBASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 GUSBP12-201ENST00000513727 720 ntBASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 AC022898.2-201ENST00000616822 1312 ntBASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
U2AF1L4Q8WU68 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 AL032819.2-201ENST00000624543 2162 ntBASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 RN7SL606P-201ENST00000472779 293 ntBASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
U2AF1L4Q8WU68 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 AC010240.3-201ENST00000607688 395 ntBASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 ZNF259P1-201ENST00000407656 1365 ntBASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
U2AF1L4Q8WU68 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 MIR564-202ENST00000385049 94 ntBASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 AC055717.3-201ENST00000622967 595 ntBASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
U2AF1L4Q8WU68 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms