Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SNED1Q8TER0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SNED1Q8TER0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNED1Q8TER0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SNED1Q8TER0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNED1Q8TER0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNED1Q8TER0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC22.3■■□□□ 1.16
SNED1Q8TER0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNED1Q8TER0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNED1Q8TER0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.3■■□□□ 1.16
SNED1Q8TER0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNED1Q8TER0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNED1Q8TER0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SNED1Q8TER0 ABCD1P5-201ENST00000445663 754 ntBASIC22.3■■□□□ 1.16
SNED1Q8TER0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC22.3■■□□□ 1.16
SNED1Q8TER0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.3■■□□□ 1.16
SNED1Q8TER0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.3■■□□□ 1.16
SNED1Q8TER0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
SNED1Q8TER0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.3■■□□□ 1.16
SNED1Q8TER0 Z83851.2-201ENST00000609564 659 ntBASIC22.3■■□□□ 1.16
SNED1Q8TER0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SNED1Q8TER0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SNED1Q8TER0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
SNED1Q8TER0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
SNED1Q8TER0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SNED1Q8TER0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNED1Q8TER0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNED1Q8TER0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNED1Q8TER0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SNED1Q8TER0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SNED1Q8TER0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNED1Q8TER0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SNED1Q8TER0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.29■■□□□ 1.16
SNED1Q8TER0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.29■■□□□ 1.16
SNED1Q8TER0 YBX2P1-201ENST00000394192 760 ntBASIC22.29■■□□□ 1.16
SNED1Q8TER0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC22.29■■□□□ 1.16
SNED1Q8TER0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.29■■□□□ 1.16
SNED1Q8TER0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SNED1Q8TER0 AP001160.2-201ENST00000596071 487 ntBASIC22.29■■□□□ 1.16
SNED1Q8TER0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.29■■□□□ 1.16
SNED1Q8TER0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC22.29■■□□□ 1.16
SNED1Q8TER0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SNED1Q8TER0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNED1Q8TER0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNED1Q8TER0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNED1Q8TER0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 AC093484.2-201ENST00000580996 2166 ntBASIC22.28■■□□□ 1.16
SNED1Q8TER0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SNED1Q8TER0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNED1Q8TER0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNED1Q8TER0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 AL591424.1-201ENST00000442569 1213 ntBASIC22.28■■□□□ 1.16
SNED1Q8TER0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.28■■□□□ 1.16
SNED1Q8TER0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNED1Q8TER0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SNED1Q8TER0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SNED1Q8TER0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.16
SNED1Q8TER0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SNED1Q8TER0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNED1Q8TER0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SNED1Q8TER0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNED1Q8TER0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.27■■□□□ 1.16
SNED1Q8TER0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC22.27■■□□□ 1.16
SNED1Q8TER0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNED1Q8TER0 PMS2P2-201ENST00000425039 1128 ntBASIC22.27■■□□□ 1.16
SNED1Q8TER0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.27■■□□□ 1.16
SNED1Q8TER0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.27■■□□□ 1.16
SNED1Q8TER0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.27■■□□□ 1.16
SNED1Q8TER0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNED1Q8TER0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SNED1Q8TER0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.27■■□□□ 1.16
SNED1Q8TER0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
SNED1Q8TER0 AC009154.2-201ENST00000621177 724 ntBASIC22.27■■□□□ 1.16
SNED1Q8TER0 AC008735.5-201ENST00000623544 497 ntBASIC22.27■■□□□ 1.16
SNED1Q8TER0 SDHAP2-201ENST00000455183 2001 ntBASIC22.27■■□□□ 1.16
SNED1Q8TER0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNED1Q8TER0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SNED1Q8TER0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SNED1Q8TER0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SNED1Q8TER0 AC009102.3-201ENST00000623118 1491 ntBASIC22.27■■□□□ 1.16
SNED1Q8TER0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SNED1Q8TER0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.26■■□□□ 1.15
SNED1Q8TER0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNED1Q8TER0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SNED1Q8TER0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SNED1Q8TER0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.26■■□□□ 1.15
SNED1Q8TER0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SNED1Q8TER0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SNED1Q8TER0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms