Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 AC011840.4-201ENST00000578471 627 ntBASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3RF3Q8TEJ3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SH3RF3Q8TEJ3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 AC004870.1-201ENST00000315132 882 ntBASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 AL031598.1-201ENST00000561511 1773 ntBASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SH3RF3Q8TEJ3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 AL353801.3-201ENST00000609898 542 ntBASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3RF3Q8TEJ3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 VENTXP7-201ENST00000475503 772 ntBASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.74■■□□□ 1.07
SH3RF3Q8TEJ3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 CROCCP3-202ENST00000420820 1947 ntBASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 TSPY12P-201ENST00000421279 868 ntBASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.73■■□□□ 1.07
SH3RF3Q8TEJ3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms