Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 DUSP5P2-201ENST00000426873 1033 ntBASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 AC105036.2-201ENST00000569468 176 ntBASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 AC022517.1-201ENST00000592429 346 ntBASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 AL121829.2-201ENST00000620908 328 ntBASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.81■□□□□ 0.28
CNIH3Q8TBE1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CNIH3Q8TBE1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 AL023806.1-201ENST00000603994 1649 ntBASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNIH3Q8TBE1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 AC018695.7-201ENST00000624587 2492 ntBASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms